Gene VIBHAR_01115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01115 
Symbol 
ID5552787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1127794 
End bp1130382 
Gene Length2589 bp 
Protein Length862 aa 
Translation table11 
GC content44% 
IMG OID640906607 
Producttype I restriction-modification system, methyltransferase subunit 
Protein accessionYP_001444333 
Protein GI156973426 
COG category[V] Defense mechanisms 
COG ID[COG0286] Type I restriction-modification system methyltransferase subunit 
TIGRFAM ID[TIGR00497] type I restriction system adenine methylase (hsdM) 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAC AACAACTAGC AGCAAAAATC TGGGAATCAG CCAACCAGAT GCGTTCAAAA 
ATCGAAGCAA ACGAATACAA AGACTACATC TTAGGCTTCA TTTTCTACAA ATATCTGAGC
GATACCCAAG TAAGCTTCCT TATCGACCAA GGGATGACAC AGGATGATAT CAAGGCATTG
ACCGAAGATG ACACAGAAAC AGTAGATTAT ATTCGAAGAG AGAAAGGGTA CTTCATTGCC
TATGACAACC TATTCTCAAC TTGGGTGGAT TCAAGTACAG AGTTTGATGA GTCGAATGTT
CGTGATGCAT TGTCTGCCTT TAACCGTCTA ATCAATAAAA AACATAAAAA ACTGTTTGAA
GGGATCTTCA CCACGTTAGA AACGGGGTTG AGCAAACTCG GTGAAACTTC TGGGAAGCGA
ACCAAAGCAA TTAGCGATTT GCTTCACCTC ATTAAAGCCA TCCCGATGAC GGGGAACCTT
GGCTATGATG TGCTGGGTTA CATCTATGAA TACCTGATCG AAAAGTTTGC CGCCAATGCG
GGCAAAAAAG CGGGCGAGTT CTATACGCCG CATGAAGTCT CGCTATTGAT GTCTGAAATC
ACCGCGCATG AGCTCAAACA TAAAGATGAG ATTGAGATTT ACGATCCAAC CAGTGGTTCG
GGCTCATTGT TGATTAACAT CGGTAGCTCA GTGGCCAAAT ACGCTAAGAG CAAAGATGAC
ATCAAATACT ACGCTCAAGA GCTTAAGCAA AGCACCTACA ACTTAACTCG TATGAACCTA
ATCATGCGTG GTATTTTGCC AGATAACATC ACCACCCGTA ACGGTGATAC GCTAGAAGAT
GACTGGCCAT ACTTTGATGA AAGCAATCCA CAAGAGTCTT ACCAACCTCT GTATGTGGAT
GCAGTGGTCT CTAACCCGCC GTATTCACAA AAGTGGGACC CAGAAAACAA AGAGAACGAT
CCGCGTTACG CACGCTTTGG CCTAGCACCA AAAACTAAAG CCGACTTTGC GTTTCTATTG
CATGACTTAT ACCACCTCAA GCCAGATGGC ATTATGACCA TTGTACTGCC ACACGGTGTG
CTTTTCCGTG GTGGTGAAGA GGGCGAGATC CGCAAGCAAC TGATCGAGAA CAACCATATT
GATGCCATCA TCGGCTTACC AGCCAACATC TTCTTTGGTA CGGGTATCCC AACTGTAATT
TTGGTGCTCA AGCAGAAGCG TGAAAACAAC GACGTATTGA TTGTTGATGC CTCAAAACAC
TTTGTGAAAG AAGGCAAAAA CAACAAACTG CAAGACTCAG ACATCAAGCG CATCATCGAT
GCCGTGATTC ATCGCCAAGA TAATGCCAAG TTCTCGAAAG TGGTGAGCAA GAAAACCATT
CAACAAAATG AGTACAACCT CAATATTCCG CGATATGTGG ACTCATCACC AGCAGCTGAA
ACGTGGGATC TTCACGCCAC CATGTTAGGC GGTATTCCAA ACTGTGAAAT CGCAGCCCTA
AAAGAGTACT GGGACGCCTT GCCAGAGCTT CATGATGCGT TGTTTAGCGC GAAATCATCC
GCTTACAGCG AGTTAGCGGT TGAAAAGAGT CAAGTGCAAA CTACTATTGC ACAGCATCCG
CAACTGCTTG GGTTTATTGC CGCATACAAG CAAGCGTTTG ATGGCTTTGA TGAGTTCCTA
AACACCACCT TAATTGAGGG TTGGGAAAGC GTTAACCGTA ACCAACAACA AGCGCAATTG
AGTGTTGAAT TGTTTAAGCG CATGCAGCCG ATTGCCTTGG TAGATAAATA CCAAGCCTAC
CAACTGCTGA GTGACCAGTG GCAGATCATT AGTGCCGACC TTGAAATGAT GCAAACCGAA
GGGTTTAAGG CAACCACGCA GGTTGACCCG AATATGATCA TCAAGAAAGT CAAAGGCAAA
GAGACCGAAG TGCAAGACGG TTGGAAAGGG CACATTATGC CGTTTGATTT GGTACAAAAA
ACGCACTTAA ACAATGAACT GCTAGCCCTA GCCAAACAAG ATGCTCGTTT AGCAGAGATC
ACCTCTTTGT TTGAGGAGAT TTTAGAGTCA CTCTCTGAAG ATGAAAAAGA AGCGGAAACC
GTAAAAGAGT CGGGTGATGG TTTTGCCAAC GCGCAAGTCA GCAAAGAGGC CAAGGTGCTA
GCGAAAGAAG CGAAAGCAAA CGGTTCATTT AATGAGGACA GCTATGAAGC CAAAATCATT
AAGGTTGCCG TGCTGATTGA AGAAGAGAAA AAACTCAAGA AAGCCTTCAA AGAAGCGGAA
ACCGCACTGC ACCTAAAAAC CAAAAAAACA ATTGAAGAGC TAACCGACAG CCAAGTGAAT
GACTTGTTAG AACTTAAATG GATCACGCCG CTGTGTGATG AACTGGCAGA GTTGCCGAAT
GCCGTAGTTA ACCGCTTAAC CATTAAAGTT CAAGTGCTTG GCGATAAGTA CGCCGTGACC
TATTCCCAAG TGGCGAATGA AATTCAAACA TCAGAACATG AGCTCGCAGA GATGATGGGC
CAATTGAAAG GTAATGAGTT TGATATGCAA GGTTTGGCGG AACTGACTAA GTTGCTGAAG
GGCGAATAA
 
Protein sequence
MNKQQLAAKI WESANQMRSK IEANEYKDYI LGFIFYKYLS DTQVSFLIDQ GMTQDDIKAL 
TEDDTETVDY IRREKGYFIA YDNLFSTWVD SSTEFDESNV RDALSAFNRL INKKHKKLFE
GIFTTLETGL SKLGETSGKR TKAISDLLHL IKAIPMTGNL GYDVLGYIYE YLIEKFAANA
GKKAGEFYTP HEVSLLMSEI TAHELKHKDE IEIYDPTSGS GSLLINIGSS VAKYAKSKDD
IKYYAQELKQ STYNLTRMNL IMRGILPDNI TTRNGDTLED DWPYFDESNP QESYQPLYVD
AVVSNPPYSQ KWDPENKEND PRYARFGLAP KTKADFAFLL HDLYHLKPDG IMTIVLPHGV
LFRGGEEGEI RKQLIENNHI DAIIGLPANI FFGTGIPTVI LVLKQKRENN DVLIVDASKH
FVKEGKNNKL QDSDIKRIID AVIHRQDNAK FSKVVSKKTI QQNEYNLNIP RYVDSSPAAE
TWDLHATMLG GIPNCEIAAL KEYWDALPEL HDALFSAKSS AYSELAVEKS QVQTTIAQHP
QLLGFIAAYK QAFDGFDEFL NTTLIEGWES VNRNQQQAQL SVELFKRMQP IALVDKYQAY
QLLSDQWQII SADLEMMQTE GFKATTQVDP NMIIKKVKGK ETEVQDGWKG HIMPFDLVQK
THLNNELLAL AKQDARLAEI TSLFEEILES LSEDEKEAET VKESGDGFAN AQVSKEAKVL
AKEAKANGSF NEDSYEAKII KVAVLIEEEK KLKKAFKEAE TALHLKTKKT IEELTDSQVN
DLLELKWITP LCDELAELPN AVVNRLTIKV QVLGDKYAVT YSQVANEIQT SEHELAEMMG
QLKGNEFDMQ GLAELTKLLK GE