Gene VIBHAR_01108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01108 
Symbol 
ID5556370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1119494 
End bp1120825 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content44% 
IMG OID640906600 
Producthypothetical protein 
Protein accessionYP_001444326 
Protein GI156973419 
COG category[R] General function prediction only 
COG ID[COG1373] Predicted ATPase (AAA+ superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGAA CACTGCTTGA AAACCTACTC ACCTGGAAAG GCAAGCCAAC CAGGAAGCCT 
TTACTGATTG ACGGTGCTAG ACAAACTGGC AAAACATTCT TATTGCAGGA ACTGTTAGGA
AGTACATTCG AAAATGTCCT AAGGATCGAT TTCTTAGAAA GTCCTGAGTT AATGGAAGCT
TTTTCTGGCT CTCTAAATCC TGATGACATC ATCACCAATA TTGAACTCTT AACAGGGCAA
ACCTTCGAAC CATCTACAGA TCTACTTATT TTAGATGAAA TTGGAGAATG CCCTAGAGCG
GTTACCGCAC TTAAATACTT TGCAGAAAAG GCTCCCAAAG CTTATGTTGC TGCAAGTGGT
TCCAATATTG GATTGCTCAC CTCCTTCCCT GTTGGAAAAG TTGAACAGCA CAACTTAAGA
CCACTGACTT TCAGGGAGTT TTTGTGGGCA TCTGGAGAGA AAGCTCTTCA AAAAGCGTTT
GACCAAAAGC TGAGTTCTTC TGCGGCTCAT TCCAAGCTAA TCGAGCTGCT AACCGATTAT
TACTTCGTTG GCGGCATGCC TGAAGCCGTA AACTCGTGGT TCGAAAACTC TCAACTCAGT
ATCATTGACC GAATTGAAGC CGTCTCTGAA GTCCATCGAA ACTTAATTGA AGGCTACATG
CGTGATTTCG GAAAATACTC TGGAAAAGTG GATGCGCAAC TCATCGAGTC TGTATTTAGA
AGCATCCCAG CCCAGTTATC TTCGGTATTC GATGACTCCG TTAAGCGGTT CAAATTCAAG
GGCGTTCACG AACGCAGATC TCGTTATGCT GAATATGAAA GTGCGATCAC ATGGCTTCAC
AAGTGTCGAC TTGCGCTAAA GAACCACCCT ATTGAAGGAC AACCTCGTGC TCCTTTAGCT
GCTTATCAGA AGGAAAATGC GGTTAAATTA TTTCTCTTTG ATGTAGGCCT GTTGAACCAT
ATGCTCGGCA CGGGTTACCG TGAAATCAAA CAGCAAGGCT ATGAATACAA GGGATATGTC
GCAGAAAACT ATGTTCAACA GGAAATCGCC GCACTAGGTA TTGAACCAAG TTTCTCTTGG
GGAGACGCAA GGGCCGAGAT AGAGTTCATC ATCGCTGACG ACCTAGGCCG TATTGTGCCT
GTAGAAGTGA AGAGCGGTAA GCGAACCCGT GCAAAATCAT TGCAGTCTTA CATCGCAAAG
TGCAAGCCCC ACAAGACAAT CAAACTTACA GCTACTCAAG GCTCTCCAGT CACAGAGAAA
GAGCACATAG TGATGCCACT TTACTACACT GAATACTTAC TTGATCACCT AAGAGATCTA
GATAAAAACT AA
 
Protein sequence
MKRTLLENLL TWKGKPTRKP LLIDGARQTG KTFLLQELLG STFENVLRID FLESPELMEA 
FSGSLNPDDI ITNIELLTGQ TFEPSTDLLI LDEIGECPRA VTALKYFAEK APKAYVAASG
SNIGLLTSFP VGKVEQHNLR PLTFREFLWA SGEKALQKAF DQKLSSSAAH SKLIELLTDY
YFVGGMPEAV NSWFENSQLS IIDRIEAVSE VHRNLIEGYM RDFGKYSGKV DAQLIESVFR
SIPAQLSSVF DDSVKRFKFK GVHERRSRYA EYESAITWLH KCRLALKNHP IEGQPRAPLA
AYQKENAVKL FLFDVGLLNH MLGTGYREIK QQGYEYKGYV AENYVQQEIA ALGIEPSFSW
GDARAEIEFI IADDLGRIVP VEVKSGKRTR AKSLQSYIAK CKPHKTIKLT ATQGSPVTEK
EHIVMPLYYT EYLLDHLRDL DKN