Gene VIBHAR_01092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01092 
Symbol 
ID5553006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp1105060 
End bp1105761 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content48% 
IMG OID640906585 
Producthypothetical protein 
Protein accessionYP_001444311 
Protein GI156973404 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGACG AAATTCACCT TCGGTATCCG TTCATGGGGA GCAGACGCAT TCGAAATGAG 
ATGGCTAAAA AAGGCCATAA CGTTAATCGT AAACGTGTCG TTCGGCTCAT GCGAGACATG 
GGCATTAGGG CTATTTACCC CAAGCCTAGA ACGACCCTAG CGAACAAAGC ACACAAGGTT 
TATCCCTACC TTTTGCGTGA TATCGAAGTC ACTTACCCGA ACCAAGCTTG GGCGATTGAC 
ATCACGTATA TCCCGATGGC TAAGGGGTTC CTGTATTTAG TCGCCATTAT CGACTGGTAT 
AGCCGAAAGG TGCTGTCTTG GCGGCTATCC AACACCATGG ACACGAGCTT TTGTATCGAA 
GCCCTTGAAG ACGCGCTTAA ACATTATGGC CCGCCAGATA TCTTCAACTC AGATCAAGGC 
AGTCAGTTTA CCAGCACCGA ATTCACACAG AAGCTACTCG ACCATGGAGT CAGGATAAGT 
ATGGATGGGA AAGGACGCTG GGTCGACAAT GTTTTCATAG AGCGATTATG GAGAAGCCTG 
AAATATGAGG AGGTTTACTT AAAAGCTTAC ACCACGCCCC GAGAAGCAGA GCTTGAAATC 
GGCCACTACA TGGTGTTTTA TAATGAGGAG CGTAACCATC AGGGACTCAA TGACCTCACT 
CCTGATGAAG CCTACTTTGG TAGGCAGAGA TACGCTGCAT GA
 
Protein sequence
MIDEIHLRYP FMGSRRIRNE MAKKGHNVNR KRVVRLMRDM GIRAIYPKPR TTLANKAHKV 
YPYLLRDIEV TYPNQAWAID ITYIPMAKGF LYLVAIIDWY SRKVLSWRLS NTMDTSFCIE 
ALEDALKHYG PPDIFNSDQG SQFTSTEFTQ KLLDHGVRIS MDGKGRWVDN VFIERLWRSL 
KYEEVYLKAY TTPREAELEI GHYMVFYNEE RNHQGLNDLT PDEAYFGRQR YAA