Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_01086 |
Symbol | |
ID | 5554578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 1098809 |
End bp | 1099729 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640906579 |
Product | transcriptional regulator |
Protein accession | YP_001444305 |
Protein GI | 156973398 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGTA GTGTTGTTAG CGGGCTGTGG CTATTTAGCC AAGTGGCAGA ACACAGCAGT TTCACCAGTG CTGCAAAAGC ATTGCACTTG ACGATCGGTG CGATCAGTCA GCAAATCATT CAATTAGAAG AGCAGCTAGG TTTTACTTTG TTTGAACGCC ATTCGCGTGG CATCCGACTA ACACCCAAAG GGTTACAATT ATCTCAATCC TCACAATTTC ACTTCACCGA GATCGGGAAG ACACTTGAAG AGCTACAGAT TGAAAAGCCC CACAATGAAA TTCGCCTCAA GCTGACGCCT TCTTTTGCGT TTAAATGGTT AGTTCCACGC CTTGAAAGCT TTCATCTAGA AAACCCCGAT CTCCAAGTGC AGATTTTTGC AGAGGGAGCA CTAGTGAATA GTGAGCTAAA GGACTATGAC GTTGCGATAG ACTACGGTTC TCATCCCTAT CGAGATAAAA GTGCAGAGCG GATTCTCGAT GAACAACTTT TGCCAGTCAT GAGTCCAAAA TACCTTGAGG ATCATGGGTG GCTAAAAACT CTTAAAGCGT CGCCAGAAAA ATGGCGAGAC GCGACGTTAC TGCACGATGC TATGCCATGG GATAAGGCTC CGCGTGACTA TGAATGGCTG TATTGGGCAT CAAGTATGGG ATTCGATTTT AAAACAGATG TAGGACACTT CTTTAATCGT ACTGATATGG CAATGTCAGC GGCCGAAGCC GGAGTGGGTA TCGCAATGGC ACGTATGGCG CTGGTGGAAG ACGAGTTAGC ATCTGGTCGC TTAGTCTCGC CATTTGAACC TGTGGATGCT AGCGCAGGTT ACTATCTGAT TATCAACAAC CAAAGTGAGC AGACGGCGAG ATTTAGATAT TGGATAATGC ACGAAACAAG TAGTCAACGT AGATTAGTTG ATCAGCACTA A
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Protein sequence | MKSSVVSGLW LFSQVAEHSS FTSAAKALHL TIGAISQQII QLEEQLGFTL FERHSRGIRL TPKGLQLSQS SQFHFTEIGK TLEELQIEKP HNEIRLKLTP SFAFKWLVPR LESFHLENPD LQVQIFAEGA LVNSELKDYD VAIDYGSHPY RDKSAERILD EQLLPVMSPK YLEDHGWLKT LKASPEKWRD ATLLHDAMPW DKAPRDYEWL YWASSMGFDF KTDVGHFFNR TDMAMSAAEA GVGIAMARMA LVEDELASGR LVSPFEPVDA SAGYYLIINN QSEQTARFRY WIMHETSSQR RLVDQH
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