Gene VIBHAR_01082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01082 
Symbol 
ID5554678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp1092978 
End bp1093571 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content46% 
IMG OID640906576 
Producthypothetical protein 
Protein accessionYP_001444302 
Protein GI156973395 
COG category[S] Function unknown 
COG ID[COG1584] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTACTA AACTGGCTAA CCCAGCGCCG CTAGGCCTAA TGGGTTTCGG TATGACCACG 
ATTCTGCTTA ACATCCACAA CGCAGGATTC TTCCCAATTG ACTCAATGAT CCTAGCAATG 
GGTATCTTCT ACGGTGGTCT TAGCCAAGTT ATTGTTGGCA TGATGTGCTT CAAACGTGGT 
GATACTTTCG GTACAACTGC GTTTACTTCA TACGGTCTAT TCTGGCTAAC ATTAGTTGGT 
CTAATCGTAA TGCCATACAT GGGTCTACCA GCTAGCCCAG CACACTTCAT GGGTTGGTAC 
CTACTACTAT GGGGTATCTT CACTGGCTTC ATGTTTATTG GTTCTCTATG TTACCCAGTA 
GCGAAGCAAG TTGTGTTTGG TTCTCTTACT ATCCTGTTCT TCCTACTTGC GGCACGTGAC 
TTCACTGGTA GCACACTTAT CGGCACTATC GCAGGCTTCG AAGGTATCTT CTGTGGCGCG 
AGCGCAATCT ACTTTGCAAT GGCTCAAGTA CTGAACAACG AATACGGTCG TACAGTGCTT 
CCAATCGGCG AAAAGCAAAA GCCTCAAGTT GCAACGCAAG AAATCGCAGC ATAA
 
Protein sequence
MSTKLANPAP LGLMGFGMTT ILLNIHNAGF FPIDSMILAM GIFYGGLSQV IVGMMCFKRG 
DTFGTTAFTS YGLFWLTLVG LIVMPYMGLP ASPAHFMGWY LLLWGIFTGF MFIGSLCYPV 
AKQVVFGSLT ILFFLLAARD FTGSTLIGTI AGFEGIFCGA SAIYFAMAQV LNNEYGRTVL 
PIGEKQKPQV ATQEIAA