Gene VIBHAR_01081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01081 
Symbol 
ID5554717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1091095 
End bp1092795 
Gene Length1701 bp 
Protein Length566 aa 
Translation table11 
GC content49% 
IMG OID640906575 
Producthypothetical protein 
Protein accessionYP_001444301 
Protein GI156973394 
COG category[R] General function prediction only 
COG ID[COG3979] Uncharacterized protein contain chitin-binding domain type 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGCAC TCAAACATCT GCCTCTTGCA TTAGGTTGTG TACTTGCTGC ACAAGCTCAT 
GCCAGCATGA ATATCCAACC TGATCCACAA AACCCAAATG GTTACGTGAT TGCTCGTGGC
GACATCCAAG CTATGGAGCA AAGTAAGACT TCTGACCCTA TGTATGCTAT CTGGTCACAA
GCGCTAGAGA CTCGTCCAAA TACGGTTGTT GAAGCGATTG TTCCAGGCGC AGCAAGTAAC
CCAGAAAACG TTCAACGTGT TGAGCGTGTT TTCCCTGAGT CTGAGTGGGA CTTCTTAACT
CAGATGGCTG CACCAGAGTA CACATATACT CGCTTCTTAC GCGCGATTGG TAAGTTCCCT
GCATTCTGTG GTGAGTACAC AGACGGGCGT GATTCAGACG CGATTTGTAA GAAATCCATC
GTGACAGCAT TCGCGCACTT TGCTCAGGAA ACCGGTGGCC ACATTGCGGT TGATAACGTA
TCGGACAACC CGCTTGCACT GGAAGAGTGG CAGCAGGCAC TCGTGCACGT ACGTGAAATG
GGGTGGTCTG AAGGTCAAGA AGGCTACACG ACAGGCTGTG GTGAGAATGA TTGGCAAAAC
AAGCGTTGGC CTTGTGAGCC TGGTCAGGGA TATTTTGGTC GTGGTGCAAA ACAGCTTTCT
TACCACTTTA ACTACGGCGC GTTCTCTGAA GTGATGTTTG ATGGCGATGC ATCGGTATTG
TTGAAAAATC CGGGCTTAGT CGCTGACTCA TGGTTGAACC TAGCTTCTGC AATTTGGTTC
TTCTTAACTC CTCAAGCGCC AAAACCAGCA ATGCTGCACG TGATTGATCG TACTTGGGTA
CCATCGCAAC GTGAAATTGA TGCGGGCATT GGTTACGGCT TTGGTACTAC GATCAACGTC
ATCAATGGCG GTATAGAGTG TGGTGAACAG AACAAAGACA AAGGCCAGCC AGTTAACCGC
ATTCGTTACT GGGAAGGTTT AGCGGCGCAC TATCAAATTC CTATCGAAGC TGATGAAACC
AATACCTGTT GGCAACAAAC GCCTTACGGT AGCTTAAACC TTAACGGCGC GACTGACGTG
CTCTACACCA ACTGGGATGG TAACTGGAAA TACTACTCAG ATCGCCCGGG CGGTCACTCA
TTTGAATGTG AGTTGGTTGG TTTCCAAACC GCGTATTCGG CACTGGTTGC TGGTGATTAC
GAGAAATGTG TTACCAACTT CTACCAATCT CATGCTGGTT GGCCTGAAGT TCGCGTTGTC
GATAAATTAG ATCCAGTCGA TCCGGTTGAT CCGCCAGTGG ATGGTATCGC TGCTTGGGAT
TCAGGCAAGG TATACAACAC GGGTGATCAA GTTTCTTACC AAGGTGCTGT GTATGAAGCG
AAGTGGTGGT CACAAGGCAA TGAGCCTACG AAAGGAGACC CTTGGAAGTT AGTTTCAGGT
ACACCAACAG AGCCGCCAGC AACAGAACCA CTGGTCACTG AGCCTCCTGT TACTGAACCG
CCTGTGACAG AGCCACTAGT CACAGAACCT GAACCACCAG TATCGGGTGA CTTTATTGCA
TGGGAACCGG GTGTCACTCA AGTAGCGAAT GGCGACAAAG TGACTTATCA AGGTAAATGC
TTTATTGCGA AAAATGGCCC AGGAGTATGG GAAACGCCAA CTCAGAGCAA TTGGTTCTGG
GATGAGATCT CTTGCCAGTA A
 
Protein sequence
MFALKHLPLA LGCVLAAQAH ASMNIQPDPQ NPNGYVIARG DIQAMEQSKT SDPMYAIWSQ 
ALETRPNTVV EAIVPGAASN PENVQRVERV FPESEWDFLT QMAAPEYTYT RFLRAIGKFP
AFCGEYTDGR DSDAICKKSI VTAFAHFAQE TGGHIAVDNV SDNPLALEEW QQALVHVREM
GWSEGQEGYT TGCGENDWQN KRWPCEPGQG YFGRGAKQLS YHFNYGAFSE VMFDGDASVL
LKNPGLVADS WLNLASAIWF FLTPQAPKPA MLHVIDRTWV PSQREIDAGI GYGFGTTINV
INGGIECGEQ NKDKGQPVNR IRYWEGLAAH YQIPIEADET NTCWQQTPYG SLNLNGATDV
LYTNWDGNWK YYSDRPGGHS FECELVGFQT AYSALVAGDY EKCVTNFYQS HAGWPEVRVV
DKLDPVDPVD PPVDGIAAWD SGKVYNTGDQ VSYQGAVYEA KWWSQGNEPT KGDPWKLVSG
TPTEPPATEP LVTEPPVTEP PVTEPLVTEP EPPVSGDFIA WEPGVTQVAN GDKVTYQGKC
FIAKNGPGVW ETPTQSNWFW DEISCQ