Gene VIBHAR_01073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01073 
Symbol 
ID5555707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp1081773 
End bp1082492 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content46% 
IMG OID640906567 
Producthypothetical protein 
Protein accessionYP_001444293 
Protein GI156973386 
COG category[T] Signal transduction mechanisms 
COG ID[COG2203] FOG: GAF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAAAG ATAGACTGTT AGATGCTCAC CGAGCAGTCA ATCGTCTTTT AGGTAAGCTT 
GCTCTGGGAA TGGAACGCGA TAGTCTCAAT CATGAAGTTA TCAAGTTAAG TGAACGCCTA 
TTTGGGAAGA GGCAAGCTTC CATTTTACGA TTGCACCCCG ATACCAACAC ATTGCATTTG 
GAATTTGCCC CGCATTTACC TGATTTCTAC AATCAAGCGA TTGAAGGGGT TGCGATTGGG 
CCGCAAATAG GATCATGCGG CGCTGCTGCG TTTTTGAAGC AAACCGTCGT TGTCAGCGAT 
ATCGATCACC ATGTTAACTG GGCACCTTTC CTTGAACTGA CTCAGCAGGC TCAACTCCGT 
GCATGTTGGT CTGTTCCGAT CATTGCTTCG GATGGCTATG TGTTGGGGAC ATTCGCTGTA 
TACAGCAATA CGCCTTCTGA GCCGCATCCC TATGAGCTCG AAGTGCTCGA AATGTTGGCT 
GCTTTGTATG CGGTAGCATT AGAGAAGTAT CGTTTAGAAG AACAACTGCA TTTTCATGCC 
AGTCGAGATC CACTCACGCA CTGTTTCAAT CGACGAGCGT TATTGACGGA AGTTGACCGA 
AAAATTAACG GTAAATGTGG TCGCAATGCT GTGGTTGGAT GTTTTTTGTT GATATTGATG 
AGTTTAAGTA CATCAATGAT CGTTTTGTTC ATGAGACTGG TGACCAAGTC TTGGTGCTAG
 
Protein sequence
MDKDRLLDAH RAVNRLLGKL ALGMERDSLN HEVIKLSERL FGKRQASILR LHPDTNTLHL 
EFAPHLPDFY NQAIEGVAIG PQIGSCGAAA FLKQTVVVSD IDHHVNWAPF LELTQQAQLR 
ACWSVPIIAS DGYVLGTFAV YSNTPSEPHP YELEVLEMLA ALYAVALEKY RLEEQLHFHA 
SRDPLTHCFN RRALLTEVDR KINGKCGRNA VVGCFLLILM SLSTSMIVLF MRLVTKSWC