| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_01070 |
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| Symbol | |
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| ID | 5555234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | + |
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| Start bp | 1077676 |
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| End bp | 1078836 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640906564 |
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| Product | outer membrane protein assembly complex subunit YfgL |
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| Protein accession | YP_001444290 |
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| Protein GI | 156973383 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1520] FOG: WD40-like repeat |
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| TIGRFAM ID | [TIGR03300] outer membrane assembly lipoprotein YfgL |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAG TCTTTAAGAA AGCCTTGTTA GGGGCATTAA CAGTGGGAAT CTTAGCTGGT
TGTGCTGGCG AGGAAGATAC CATTGTCATG GCTCCCCTAC CTCAGGTAGA CAGCGAGTTT
ACGCCAAGCG CGAAATGGTC GACGTCGATT GGTGATGGCG TAGGGCACTA TTTCTCAAAA
CTGTCGCCTG TTGTGGCAAA TGACACTTTG TTTGTTGCAA GCCGTGATGG TCTAGTTAAA
GCGCTGGATC CAGAAAACGG TAAGCAAAAA TGGCAAATTG ACCTAGAAGA AGATGTGATT
GCGCGTCTTT CTGGTGGCAT CACTGCCGCT TACGGTAACC TGTACATCGG TTCTGAAAAT
GGTGAAGTCA TTGCACTTAG CCAAGAAACC GGTGAAATCA TTTGGCGTAT CGAAGTTGGT
GGTGAAGTTC TAGCACGACC GGTTGCGGAT TCGGGCATGA TCATCGTAAA CACGAGCCGT
GGCACGTTGA TTGCGTTAGA TGAAAGCACG GGTGAACAAC GCTGGGCACT GAGTACCGAA
GTACCAAACC TAACGCTACG TGGCGATAGC ACGCCAACGG CGATCGGTGG TGGTGTATTC
TGGGGTACGG CAAACGGCCG ACTGGCAGCA GCGATTGTTG AACGTGGTCA GCTTATTTGG
CAACAACCAG TAGGTACACC AAAAGGTGCA ACGGAAATCG ATCGTCTGGT AGACGTAGAT
TCTTCACCGG TTGTTCTAGG TGGCACTCTT TTCACCATCG GTTATAACGG TCAGCTTATT
GCTATCGACT TGCGCAGCGC AAACCCAATT TGGAAGCGCA ACTACTCATC GGCGAACGAT
ATCGCGACAG ATGGTAGCCG TATTTTCGTG ATCACTGAGA AAGATCATGT AGTGGCAGTC
GATGCTCGCA GCGGTACTGA ACTTTGGGAA AACAGCAAGC TGGAATACCG TCAGCTTACT
GCACCAGTTA TCGTTGATAA CTACCTAGTG GTGGGTGATA CATTGGGTTA CCTACACTGG
ATCGATCGCT CTACAGGCGA ATTCGTTGCA CAACAATATG TCGATGACAG TGGTTTTGCT
GTTGGTCCGA CGTTATTGTC TGATGGTTAC GTGATTACAA CTCGCAATGG CGATGTAAAG
AAACTAACCA TTAACGAATA A
|
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| Protein sequence | MKRVFKKALL GALTVGILAG CAGEEDTIVM APLPQVDSEF TPSAKWSTSI GDGVGHYFSK
LSPVVANDTL FVASRDGLVK ALDPENGKQK WQIDLEEDVI ARLSGGITAA YGNLYIGSEN
GEVIALSQET GEIIWRIEVG GEVLARPVAD SGMIIVNTSR GTLIALDEST GEQRWALSTE
VPNLTLRGDS TPTAIGGGVF WGTANGRLAA AIVERGQLIW QQPVGTPKGA TEIDRLVDVD
SSPVVLGGTL FTIGYNGQLI AIDLRSANPI WKRNYSSAND IATDGSRIFV ITEKDHVVAV
DARSGTELWE NSKLEYRQLT APVIVDNYLV VGDTLGYLHW IDRSTGEFVA QQYVDDSGFA
VGPTLLSDGY VITTRNGDVK KLTINE
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