Gene VIBHAR_01068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01068 
SymbolhisS 
ID5555114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1075655 
End bp1076923 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content49% 
IMG OID640906562 
Producthistidyl-tRNA synthetase 
Protein accessionYP_001444288 
Protein GI156973381 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0124] Histidyl-tRNA synthetase 
TIGRFAM ID[TIGR00442] histidyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCAAAGA AAATCCAAGC AATCCGAGGC ATGAACGACT GCCTTCCAAC TCAGTCTCCG 
CTGTGGCAGA AACTTGAAAA CGCAGTAAAA AGTACTGTGA GCGCATACGG CTACAACGAA
GTGCGCATGC CAATCGTTGA AGAAACAAAC CTATTCAGCC GCGCGGTTGG TGAAGAGACT
GATGTCGTTT CAAAAGAAAT GTACACCTTT GATGATCGTA ACGGAGACAG CCTAACTCTT
CGCCCTGAAG GTACGGCGGG CTGTGTACGT GCATGTATTC AAAACAGCCT GATTAACCGT
GATGAACAAC GTCTATGGTA CATGGGCCCT ATGTTCCGCC ACGAGCGTCC GCAGAAAGGT
CGTTACCGTC AATTCCACCA GTGTGGTGTT GAGGTGTTCG GTCTAAATGG TCCAGATGTT
GATGCTGAGC TTATCATGAT GACAGCACGT CTATGGCGTG AGCTGGGTAT CAATGAACAT
GTTCGTCTTG AGCTTAACTC TATCGGTTCT CAAGAAGACC GCGCAGACTA CCGCACGGCA
CTGGTTGCAT TCCTTGAGCA ACATATCGAT GTGCTAGACG AAGATTGTAA GCGTCGCATG
CACACGAACC CACTGCGAGT TCTGGATACG AAGAACCCTG AAGTTCAGGC TATTTTAGGT
GATGCACCTC GTCTTTCTGA GTACTTAGGT GAAGAATCTA AAGCACACTT CGCAGGTCTA
TGTGAACTTT TAGACGCTGC AGGTATCGAA TACACAGTTA ACGAGCGTCT AGTTCGTGGT
CTGGATTACT ACAACCGCAC GGTATTTGAG TGGATCACTG AGAGCCTAGG TGCTCAAGGC
ACAGTATGTG GCGGTGGTCG TTACGATGGT CTTGTAGAGC AATTAGGCGG CAGTGCAACA
CCAGCTGTGG GCTTTGCTAT GGGTCTAGAG CGTCTTGTAC TGATGCTAGA AACACTAGAG
CTAACAGACG TTCGTCGTAG TGTCGATGTT TACGTAGTGA CAGCAGGCGA AGGCACAATG
ATGGTGGGTA TGAAGCTAGC AGAACAGCTT CGTGAAGCAA TCCCAGGCGT TCGCGTGATG
AGCCACTTCG GTGGTGGTAA CTTCAAGAAA CAGTTTAAGC GCGCAGATAA AGTGGGTGCT
GTAGTAGCAT TGGTTCTGGG CGAAAATGAA GTTGCAGAAA ACACCGTAGT ACTAAAAGAC
TTGGTGGGTG GTGAGCAAGA GACTTACAAC CAAGCAGAAG TTGCTGAGAA GATCGCAGCA
CTGATTTAA
 
Protein sequence
MAKKIQAIRG MNDCLPTQSP LWQKLENAVK STVSAYGYNE VRMPIVEETN LFSRAVGEET 
DVVSKEMYTF DDRNGDSLTL RPEGTAGCVR ACIQNSLINR DEQRLWYMGP MFRHERPQKG
RYRQFHQCGV EVFGLNGPDV DAELIMMTAR LWRELGINEH VRLELNSIGS QEDRADYRTA
LVAFLEQHID VLDEDCKRRM HTNPLRVLDT KNPEVQAILG DAPRLSEYLG EESKAHFAGL
CELLDAAGIE YTVNERLVRG LDYYNRTVFE WITESLGAQG TVCGGGRYDG LVEQLGGSAT
PAVGFAMGLE RLVLMLETLE LTDVRRSVDV YVVTAGEGTM MVGMKLAEQL REAIPGVRVM
SHFGGGNFKK QFKRADKVGA VVALVLGENE VAENTVVLKD LVGGEQETYN QAEVAEKIAA
LI