Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_01065 |
Symbol | |
ID | 5554334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 1071965 |
End bp | 1073092 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640906559 |
Product | ribosomal RNA large subunit methyltransferase N |
Protein accession | YP_001444285 |
Protein GI | 156973378 |
COG category | [R] General function prediction only |
COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACTG AAAAAATCAA TCTACTCGAC TTTGATCGCA AGGGCATGCG TCAATTTTTC GCGGATGAGC TAGGCGAAAA AGCGTTCCGT GCTGATCAGG TTATGAAGTG GATCTACCAT TTCGGTGTTG ATGACTTCGA CAACATGACG AACATCAACA AGAAGCTACG TGAAAAACTG CAGCACAAGT GTGAAATCAA AGCACCTACC GTGGCAGAAG CTCAGCACTC TTCAGACGGC ACAATCAAGT GGGCGATGAA GGTTGGTGAC CAAGACGTAG AAACGGTTTA CATCCCAGAA GATGACCGAG CAACCTTGTG TGTGTCTTCT CAGGTAGGTT GCGCGTTGGA ATGTAAGTTC TGTTCAACAG CACAACAGGG CTTCAACCGT AACCTAAAAG TATCTGAAAT CATTGGTCAG GTATGGCGTG CAGCACGTGA AATCGGTTTG CAGAAAGAAA CAGGCCGTCG TCCAATCACT AACGTAGTGA TGATGGGCAT GGGTGAGCCA CTTCTTAACA TGAAGAACCT AATCCCAGCA CTAGAAATCA TGCTTGATGA TCTGGGTTTC GGTCTTTCTA AACGTCGTGT AACCGTATCA ACTTCAGGTG TGGTTTCTGG TCTTGATCAG ATGACGGGCA AAATCGACGT CGCATTGGCG ATTTCTCTAC ACGCGCCAAA CGACGAACTA CGTAGCCAAA TCATGCCAAT CAACGACCGT TGGGATATCC AAGACTTCCT AGCGTCTGTT CGTCGTTACA TTGCGTCTTC AAATGCGAAC CGCGGTAAAG TAACCGTTGA GTACGTACTG CTTGATCATG TGAACGATGA CATGGACCAC GCACGTGAAT TGGCTGAATT GATGAAAGAT ACCCCATGTA AGATCAACCT GATTCCGTTT AACCCGTACC CGGGTTCTCC TTACAAGAAG CCAAGTAACT CGCGCATTGA CCGTTTCCAG AAAACGCTAA TGCAATACGA GCACACAGTA ACGGTTCGTA AAACGCGCGG TGATGATATC GATGCAGCAT GTGGTCAGTT GGTTGGTGAT GTTATTGACC GCACAAAACG TACCGCAGCT TTAAAAGCAG CACGTGGTGC AGAAACCATC GACGTAAAAG CGGTGTAA
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Protein sequence | MTTEKINLLD FDRKGMRQFF ADELGEKAFR ADQVMKWIYH FGVDDFDNMT NINKKLREKL QHKCEIKAPT VAEAQHSSDG TIKWAMKVGD QDVETVYIPE DDRATLCVSS QVGCALECKF CSTAQQGFNR NLKVSEIIGQ VWRAAREIGL QKETGRRPIT NVVMMGMGEP LLNMKNLIPA LEIMLDDLGF GLSKRRVTVS TSGVVSGLDQ MTGKIDVALA ISLHAPNDEL RSQIMPINDR WDIQDFLASV RRYIASSNAN RGKVTVEYVL LDHVNDDMDH ARELAELMKD TPCKINLIPF NPYPGSPYKK PSNSRIDRFQ KTLMQYEHTV TVRKTRGDDI DAACGQLVGD VIDRTKRTAA LKAARGAETI DVKAV
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