Gene VIBHAR_01065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01065 
Symbol 
ID5554334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1071965 
End bp1073092 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content47% 
IMG OID640906559 
Productribosomal RNA large subunit methyltransferase N 
Protein accessionYP_001444285 
Protein GI156973378 
COG category[R] General function prediction only 
COG ID[COG0820] Predicted Fe-S-cluster redox enzyme 
TIGRFAM ID[TIGR00048] radical SAM enzyme, Cfr family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACTG AAAAAATCAA TCTACTCGAC TTTGATCGCA AGGGCATGCG TCAATTTTTC 
GCGGATGAGC TAGGCGAAAA AGCGTTCCGT GCTGATCAGG TTATGAAGTG GATCTACCAT
TTCGGTGTTG ATGACTTCGA CAACATGACG AACATCAACA AGAAGCTACG TGAAAAACTG
CAGCACAAGT GTGAAATCAA AGCACCTACC GTGGCAGAAG CTCAGCACTC TTCAGACGGC
ACAATCAAGT GGGCGATGAA GGTTGGTGAC CAAGACGTAG AAACGGTTTA CATCCCAGAA
GATGACCGAG CAACCTTGTG TGTGTCTTCT CAGGTAGGTT GCGCGTTGGA ATGTAAGTTC
TGTTCAACAG CACAACAGGG CTTCAACCGT AACCTAAAAG TATCTGAAAT CATTGGTCAG
GTATGGCGTG CAGCACGTGA AATCGGTTTG CAGAAAGAAA CAGGCCGTCG TCCAATCACT
AACGTAGTGA TGATGGGCAT GGGTGAGCCA CTTCTTAACA TGAAGAACCT AATCCCAGCA
CTAGAAATCA TGCTTGATGA TCTGGGTTTC GGTCTTTCTA AACGTCGTGT AACCGTATCA
ACTTCAGGTG TGGTTTCTGG TCTTGATCAG ATGACGGGCA AAATCGACGT CGCATTGGCG
ATTTCTCTAC ACGCGCCAAA CGACGAACTA CGTAGCCAAA TCATGCCAAT CAACGACCGT
TGGGATATCC AAGACTTCCT AGCGTCTGTT CGTCGTTACA TTGCGTCTTC AAATGCGAAC
CGCGGTAAAG TAACCGTTGA GTACGTACTG CTTGATCATG TGAACGATGA CATGGACCAC
GCACGTGAAT TGGCTGAATT GATGAAAGAT ACCCCATGTA AGATCAACCT GATTCCGTTT
AACCCGTACC CGGGTTCTCC TTACAAGAAG CCAAGTAACT CGCGCATTGA CCGTTTCCAG
AAAACGCTAA TGCAATACGA GCACACAGTA ACGGTTCGTA AAACGCGCGG TGATGATATC
GATGCAGCAT GTGGTCAGTT GGTTGGTGAT GTTATTGACC GCACAAAACG TACCGCAGCT
TTAAAAGCAG CACGTGGTGC AGAAACCATC GACGTAAAAG CGGTGTAA
 
Protein sequence
MTTEKINLLD FDRKGMRQFF ADELGEKAFR ADQVMKWIYH FGVDDFDNMT NINKKLREKL 
QHKCEIKAPT VAEAQHSSDG TIKWAMKVGD QDVETVYIPE DDRATLCVSS QVGCALECKF
CSTAQQGFNR NLKVSEIIGQ VWRAAREIGL QKETGRRPIT NVVMMGMGEP LLNMKNLIPA
LEIMLDDLGF GLSKRRVTVS TSGVVSGLDQ MTGKIDVALA ISLHAPNDEL RSQIMPINDR
WDIQDFLASV RRYIASSNAN RGKVTVEYVL LDHVNDDMDH ARELAELMKD TPCKINLIPF
NPYPGSPYKK PSNSRIDRFQ KTLMQYEHTV TVRKTRGDDI DAACGQLVGD VIDRTKRTAA
LKAARGAETI DVKAV