Gene VIBHAR_01059 details

Gene Information

• Locus tag: VIBHAR_01059
• Symbol: hscA
• ID: 5555117
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: +
• Start bp: 1065873
• End bp: 1067726
• Gene Length: 1854 bp
• Protein Length: 617 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640906553
• Product: chaperone protein HscA
• Protein accession: YP_001444279
• Protein GI: 156973372
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR01991] Fe-S protein assembly chaperone HscA

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCACTAC TTCAAATCGC AGAACCGGGC CAAAGCTCGG CACCTCATGA GCACAAGTTA 
GCAGCGGGTA TCGACTTAGG TACCACCAAC TCTTTGGTTG CATCTGTTCG CAGCGGCGAC 
GCAAAAACAC TGACAGATGA CCAAGGTCGT AGCATTTTGC CGTCTGTGGT GAACTACGCA 
CAAGATACGG CTCTAGTTGG TTACGAGGCC AAAGCTAAAG CAGAGCAAGA ACCAGAAAAC 
ACCATTATTT CGGTAAAACG TCTAATTGGT CGTTCATTAA AAGACATTCA AGCTCGCTAC 
CCATCTTTGC CTTACCAATT TAAAGAAAGC GACAACGGTC TGCCTATTCT TCAAACTGCG 
CAAGGTGACA AGAACCCGAT TGAAGTGTCT GCTGACATTC TTAAATCACT AGGCAAACGT 
GCAGAAGAGA CTCTAGGTGG CGAGTTAGCT GGTGTGGTTA TTACTGTTCC TGCTTACTTT 
GATGATGCTC AACGTGCTGG TACAAAAGAT GCGGCGAAAT TGGCGGGTCT TCATGTACTG 
CGTCTGCTTA ACGAGCCGAC AGCTGCAGCG ATCGCTTACG GTCTAGACTC TGGTCAAGAG 
GGCGTGATTG CGGTTTACGA TCTAGGTGGT GGTACATTCG ATATCTCTAT CCTACGTTTG 
TCGAAAGGTG TATTTGAAGT ATTAGCAACA GGCGGTGACT CTGCGCTAGG CGGCGATGAT 
TTTGACCACC TATTAGCGGA TTACCTAATG GAGCAGGCTG GTCTAGAAGC GCCGCTTTCT 
GCTGAGAAAA ACCGTGCACT ACTGAACATT GCAACAGCAA CTAAGATTGC TTTTTCTGAG 
CAAGACTGCG TTGATGTTGA TGTATTTGGC TGGAAAGGTG CAGTGACTCG CGAGCAGTTC 
GAAGAGCTGA TTCGTCCGCT AGTGAAGAAA ACCCTAATGT CTTGCCGTCG TGCGCTGAAA 
GATGCGGATG TGGATGCGGA AGATGTACTT GAAGCGGTCA TGGTTGGCGG TTCAACTCGC 
ACATTGCTTG TTCGTGAAAT GGTCGGTGAA TTCTTCGGTC GTACACCACT GACAAGCATT 
AACCCAGATG AAGTTGTTGC AATCGGCGCA GGTATTCAAG CAGATATCTT GGCGGGCAAT 
AAGCCTGACT CGGAAATGTT GCTTCTGGAC GTTATTCCTT TGTCCCTTGG TATTGAAACC 
ATGGGGGGGT TGGTTGAGAA AATCATTCCA CGTAATACCA CCATCCCTGT GGCTCGTGCA 
CAAGAATTTA CGACGTTCAA AGATGGTCAA ACAGCAATGA GCGTTCACAC CGTACAAGGT 
GAGCGTGAAA TGGTGGATGA CTGCCGCTCA TTGGCTCGTT TCTCATTGAA AGGCATTCCA 
CCAATGGTGG CAGGTGCTGC GCACATTCGC GTGACGTACC AAGTGGACGC TGATGGTCTA 
TTGTCTGTCA CCGCGATGGA AAAGAGCACG GGTGTTCAGG CTGAAATCCA AGTGAAACCT 
TCTTACGGCC TAAGCGATGA TGAAGTCGCA AACATGCTGC GTGACTCGAT GACTTACGCG 
AAAGAAGATA TGCAGGCTCG TGCATTGGCT GAGCAGCGCG TAGAAGCGGA TCGTGTGATT 
GAAGGCTTGA TTGCAGCGAT GCAAGCTGAT GGTGATGAAC TACTATCAGA CCAAGAGAAA 
CAAGACCTAG TTAAAGTGAT TGAAGCGCTG ATTGAACTGC GCAACGGCGA AGATGCAGAC 
GCCATCGAGC AAGGCATCAA AGACACCGAC AAAGCAAGCC AAGATTTTGC GTCGCGCCGT 
ATGGATAAAT CGATTCGAGC TGCACTGTCA GGTCAGTCAG TTAATGATAT ATAA 

 

Protein sequence

MALLQIAEPG QSSAPHEHKL AAGIDLGTTN SLVASVRSGD AKTLTDDQGR SILPSVVNYA 
QDTALVGYEA KAKAEQEPEN TIISVKRLIG RSLKDIQARY PSLPYQFKES DNGLPILQTA 
QGDKNPIEVS ADILKSLGKR AEETLGGELA GVVITVPAYF DDAQRAGTKD AAKLAGLHVL 
RLLNEPTAAA IAYGLDSGQE GVIAVYDLGG GTFDISILRL SKGVFEVLAT GGDSALGGDD 
FDHLLADYLM EQAGLEAPLS AEKNRALLNI ATATKIAFSE QDCVDVDVFG WKGAVTREQF 
EELIRPLVKK TLMSCRRALK DADVDAEDVL EAVMVGGSTR TLLVREMVGE FFGRTPLTSI 
NPDEVVAIGA GIQADILAGN KPDSEMLLLD VIPLSLGIET MGGLVEKIIP RNTTIPVARA 
QEFTTFKDGQ TAMSVHTVQG EREMVDDCRS LARFSLKGIP PMVAGAAHIR VTYQVDADGL 
LSVTAMEKST GVQAEIQVKP SYGLSDDEVA NMLRDSMTYA KEDMQARALA EQRVEADRVI 
EGLIAAMQAD GDELLSDQEK QDLVKVIEAL IELRNGEDAD AIEQGIKDTD KASQDFASRR 
MDKSIRAALS GQSVNDI