Gene VIBHAR_01058 details

Gene Information

• Locus tag: VIBHAR_01058
• Symbol: hscB
• ID: 5555198
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: +
• Start bp: 1065336
• End bp: 1065851
• Gene Length: 516 bp
• Protein Length: 171 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640906552
• Product: co-chaperone HscB
• Protein accession: YP_001444278
• Protein GI: 156973371
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1076] DnaJ-domain-containing proteins 1
• TIGRFAM ID: [TIGR00714] Fe-S protein assembly co-chaperone HscB

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCACT TTGAATTATT TGGGCTACCA AGTCAGTTTC AGCTGGATGG TAGCCTTCTT 
TCTTCTCAGT TCCGAGAACT ACAAAAACGC TTCCACCCAG ACAATTTTGC GACCGCCTCT 
GAGCGCGACC GCTTGATGGC CGTCCAAAAA GCAGCGCAAA TCAACGATGC GTATCAAGTA 
CTTAAGCATC CTATCTCTCG CGCTGAATAC ATTCTGGCAG AAAACGGCAC AGAAATTCGT 
GGTGAGCAAC AAACCATGCA AGACCCGATG TTCTTAATGG AGCAAATGGA ATTGCGTGAA 
GAACTGGAAG ACATTGCTGA CAGCTCTGAT CCTGAATCAG CGCTTTTTGA CTTCGATTCT 
AAGGTCAGCA AAATGTACAA ACAGCATTTG GCGAGTGTAG AACAAGAACT TGATCAAGGT 
CTTTGGGCGG AAGCTGCAGA CCGAGTTCGT AAACTCAAAT TCATTGCCAA GCTAAAGAAC 
GAAATTGAAC TGGTTGAAGA TAAACTCCTC GGCTAG 

 

Protein sequence

MNHFELFGLP SQFQLDGSLL SSQFRELQKR FHPDNFATAS ERDRLMAVQK AAQINDAYQV 
LKHPISRAEY ILAENGTEIR GEQQTMQDPM FLMEQMELRE ELEDIADSSD PESALFDFDS 
KVSKMYKQHL ASVEQELDQG LWAEAADRVR KLKFIAKLKN EIELVEDKLL G