| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_01046 |
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| Symbol | tgt |
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| ID | 5555762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | + |
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| Start bp | 1055613 |
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| End bp | 1056749 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640906540 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_001444266 |
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| Protein GI | 156973359 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAAATTAT CATTCGATCT TAAAAAGAAA AACGGCAATG CGCGTCGTGG TCAATTGACC
TTCGAACGTG GCACTGTTCA AACTCCAGCA TTCATGCCAG TAGGTACTTA CGGTACGGTT
AAAGGCATGA CTCCGGAAGA AGTAAAAGGC ACGGGTGCAG AAATCCTGCT AGGCAATACT
TTCCACCTAT GGTTACGTCC TGGTCAAGAA GTGATGAAAA TGCACGGTGA CCTGCACGAT
TTCATGAACT GGCACGGTCC TATTCTTACT GATTCAGGCG GTTTCCAAGT ATTCAGCCTA
GGTAAAATGC GTAAGATCAC TGAGAAAGGT GTTCACTTCC GTAGCCCTGT AAACGGCGAC
AAGATTTTCA TGGACGCTGA AAAGTCGATG GAAATCCAAA AAGACCTAGG TTCTGACATC
GTAATGATCT TCGACGAGTG TACGCCATAC CCAGCGACAC ACAACGAAGC GAAAAAATCG
ATGGAAATGT CACTACGTTG GGCACAACGC TCACGTGACC ACTTCGATAA GCTAGAAAAC
CCGAACAACC TATTTGGTAT CGTTCAAGGT GGTGTTTACG AAGATCTGCG TGATGTGTCT
ATCAAAGGCC TGACGGAAAT CGGTTTTGAT GGTTACGCGG TTGGTGGTCT TGCAGTAGGC
GAACCGAAAG AAGACATGCA CCGTATCCTT GAGCACACGT GTCCACAGCT TCCAGAAGAC
AAGCCTCGTT ACCTAATGGG CGTAGGCAAA CCGGAAGATT TGGTTGAAGG TGTTCGTCGT
GGTATCGACA TGTTTGACTG TGTAATGCCA ACGCGTAACG CGCGTAATGG TCACCTATTT
GTGACTGGTG GTGTGATCAA GATCCGTAAT GCGAAACATA AAACGGATAC AACTCCGCTA
GATCCGCACT GTGACTGTTA CACTTGTCAG CACTACAGCA AATCGTACCT TCACCACCTA
GAGCGTTGTA ACGAAATTCT AGGTGCTCGT CTGAACACTA TCCATAACCT ACGCTACTAT
CAGCGTCTGA TGGAAAGCAT TCGTAAGGCG ATTGATGAAG ATCGTTTCGA TGAGTTCGTT
ACTGAGTTCT ATGAGCGTCG TGGTCGTGAA GTACCACCAC TAGCAAAAGA GCAGTAA
|
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| Protein sequence | MKLSFDLKKK NGNARRGQLT FERGTVQTPA FMPVGTYGTV KGMTPEEVKG TGAEILLGNT
FHLWLRPGQE VMKMHGDLHD FMNWHGPILT DSGGFQVFSL GKMRKITEKG VHFRSPVNGD
KIFMDAEKSM EIQKDLGSDI VMIFDECTPY PATHNEAKKS MEMSLRWAQR SRDHFDKLEN
PNNLFGIVQG GVYEDLRDVS IKGLTEIGFD GYAVGGLAVG EPKEDMHRIL EHTCPQLPED
KPRYLMGVGK PEDLVEGVRR GIDMFDCVMP TRNARNGHLF VTGGVIKIRN AKHKTDTTPL
DPHCDCYTCQ HYSKSYLHHL ERCNEILGAR LNTIHNLRYY QRLMESIRKA IDEDRFDEFV
TEFYERRGRE VPPLAKEQ
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