Gene VIBHAR_01042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01042 
Symbol 
ID5556093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1051679 
End bp1052992 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content49% 
IMG OID640906536 
Productisocitrate lyase 
Protein accessionYP_001444262 
Protein GI156973355 
COG category[C] Energy production and conversion 
COG ID[COG2224] Isocitrate lyase 
TIGRFAM ID[TIGR01346] isocitrate lyase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAACT TAACTCGCCG CCAACAAATT GAAGCTCTGG AAAAAGATTG GGCAACCAAC 
CCACGCTGGA AAAATGTAAA GCGTACTTAC ACAGCAGAAG AAGTAGTAGA ACTGCGTGGC
TCTATGGTAC CTGCGAACAC AATCGCACAA CGTGGTGCTG ACAAACTTTG GTCACTGGTC
AACGGTAGTT CAAAGAAAGG CTACGTAAAC TGTCTTGGTG CACTAACGGG TGGTCAAGCC
GTACAGCAAG CGAAAGCGGG TATTGAAGCT ATTTACCTAT CAGGTTGGCA GGTAGCAGCG
GATAACAACA CCGCTTCGAC GATGTACCCA GACCAATCCC TGTACCCAGT AGATTCGGTA
CCGTCGGTAG TAAAACGCAT CAACAACTCA TTCCGTCGTG CAGACCAAAT TCAGTGGTCA
GCAGGTAAGT CACCAGAAGA TGAAGGCGGT ATTGATTACT TCCTACCAAT CGTAGCGGAT
GCGGAAGCAG GCTTTGGTGG GGTATTGAAC GCTTACGAGC TAATGAAATC GATGATCGAC
GCAGGTGCGG CAGGTGTTCA CTTTGAAGAC CAACTGGCAT CAGTGAAGAA GTGTGGCCAC
ATGGGCGGTA AAGTACTGGT TCCAACTCAA GAAGCGGTGC AAAAACTGGT AGCGGCTCGC
CTTGCAGCAG ACGTTGCAGG CACGACAACG CTGGTAATTG CGCGTACCGA TGCAAACGCA
GCAGACCTAC TAACGTCTGA TTGTGACCCA TACGATAAAG ACTTTATTCA AGGAGAGCGT
ACGCCAGAGG GCTTCTACCG TGTACGTGCA GGTATCGACC AAGCTATCTC TCGTGGCCTA
GCTTACGCGC CATATGCGGA TCTAATCTGG TGTGAGACAG CAACGCCATG TCTAGAAGAA
GCACGCAAGT TTGCAGAAGC AATTCATGCA GAGTACCCAG ACCAACTGTT GGCATACAAC
TGCTCGCCTT CATTCAACTG GGAGAAGAAC CTAGACGCAG AAACCATTGC TAAGTTCCAA
CAAGAGCTGG CTAACATGGG CTACAAGTAC CAGTTCATTA CGCTAGCAGG TATCCACAAC
ATGTGGTTCA ACATGTTCGA ATTGGCACAC GCTTACGCTC AAGGCGAAGG TATGCGTCAT
TATGTTGAGA AGGTTCAACG TCCTGAGTTT GAAGCGGCAG AAAAAGGTTA CACGTTCGTA
GCGCACCAAC AAGAAGTTGG TACGGGTTAC TTCGATAGAA TGACCAACAC AATTCAAGGC
GGTAACTCGT CAGTGACAGC ACTGACAGGT TCTACTGAAG AAGACCAATT CTAA
 
Protein sequence
MTNLTRRQQI EALEKDWATN PRWKNVKRTY TAEEVVELRG SMVPANTIAQ RGADKLWSLV 
NGSSKKGYVN CLGALTGGQA VQQAKAGIEA IYLSGWQVAA DNNTASTMYP DQSLYPVDSV
PSVVKRINNS FRRADQIQWS AGKSPEDEGG IDYFLPIVAD AEAGFGGVLN AYELMKSMID
AGAAGVHFED QLASVKKCGH MGGKVLVPTQ EAVQKLVAAR LAADVAGTTT LVIARTDANA
ADLLTSDCDP YDKDFIQGER TPEGFYRVRA GIDQAISRGL AYAPYADLIW CETATPCLEE
ARKFAEAIHA EYPDQLLAYN CSPSFNWEKN LDAETIAKFQ QELANMGYKY QFITLAGIHN
MWFNMFELAH AYAQGEGMRH YVEKVQRPEF EAAEKGYTFV AHQQEVGTGY FDRMTNTIQG
GNSSVTALTG STEEDQF