Gene VIBHAR_01006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01006 
Symbol 
ID5554525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1016256 
End bp1016984 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content48% 
IMG OID640906500 
Producthypothetical protein 
Protein accessionYP_001444232 
Protein GI156973325 
COG category[S] Function unknown 
COG ID[COG1496] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00726] uncharacterized protein, YfiH family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGACAA TTGTTCCTAA CTGGCCAGCA CCAAAAAACG TTAAAGCTTT CGCCTCTACC 
AGAGTCGGAG GCTTTTCGAC TGCGCCTTAT CAAGGGCTTA ACCTTGGTGC TCATGTTGGG
GATGACTTGT CCATCGTAGA AAAGAACCGT GACTGGTTGG TGCAACAAGC AAAGATGCCT
AGTGCGCCAA TCTGGTTGAA CCAAACCCAT TCTACAGTGG TTGCTCAAGT GAGTGATCCA
ACAACGCAAG TACTCGATGC GGATGGTGTG TTTACTTCTG CAAGTCAGGT TGTTTGTTCA
GCGATGACAG CGGACTGCTT GCCCGTTTTA TTAACCAATA TGCAAGGCAC CCAAGTTGCG
GCCGTTCATG CTGGTTGGCG CGGCTTAGCA AATGGTATCG TTGAAAACGC CCTCGAGTTG
TTTTCTGGTG AGGTAATGGC GTGGCTTGGT CCTGCAATTG GTCCTCAAGC ATTTGAAGTC
GGTGAAGATG TCCTGCAAGC CTTTGTGGAT TTCGACTCAC AAGCCCATCA AGCATTTACT
CCCCGTGACG TTGAAGGGAA GTGGCTGGCG GACATGTCTA AACTTGCAAC TCAGCGTCTC
AATAAATTTG GCATTACTCA GGTATTCGAT TCAGGCCTGT GTACTTTCCA AGACAAAGAA
GACTTCTATT CTTATCGCCG TGATGGTGTG ACGGGTCGAC AAGCCACTTT TATTTGGATT
GAAGACTGA
 
Protein sequence
MKTIVPNWPA PKNVKAFAST RVGGFSTAPY QGLNLGAHVG DDLSIVEKNR DWLVQQAKMP 
SAPIWLNQTH STVVAQVSDP TTQVLDADGV FTSASQVVCS AMTADCLPVL LTNMQGTQVA
AVHAGWRGLA NGIVENALEL FSGEVMAWLG PAIGPQAFEV GEDVLQAFVD FDSQAHQAFT
PRDVEGKWLA DMSKLATQRL NKFGITQVFD SGLCTFQDKE DFYSYRRDGV TGRQATFIWI
ED