Gene VIBHAR_00992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00992 
Symbol 
ID5555073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp1000284 
End bp1001357 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content47% 
IMG OID640906486 
Productphospho-2-dehydro-3-deoxyheptonate aldolase 
Protein accessionYP_001444218 
Protein GI156973311 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 
TIGRFAM ID[TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAGAA GTGAATTGAG CAACATCAAC ATCAGCGAAG AACAAGTACT GATCACGCCA 
GAGGAGCTAA AAGTGAAGCT TCCTCTAAGT GAAAAAGCGC GTCGTTTTAT TCAAGAGTCT 
CGTCAAACCA TCGCTGACAT CATTCACAAG AAAGATCATC GTCTACTTGT TGTATGTGGA 
CCATGTTCTA TCCATGACGT AGAGGCAGCG AAGGATTACG CTAAGCGTCT AAAAGCTCTT 
TCTGAACAAC TAAGCGACCA ACTGTATATT GTAATGCGTG TTTACTTTGA GAAGCCTCGA 
ACCACGGTTG GTTGGAAAGG CCTGATCAAT GACCCACACC TAGATGGCAG CTTCGACATT 
GAACATGGTC TGCATGTTGG TCGTGATCTG CTGGCTGAAT TGGCTGAGAT GGAAATCCCA 
CTAGCAACAG AAGCCCTTGA CCCAATCAGC CCGCAATACC TTGCGGATAC CTTTAGCTGG 
GCTGCGATCG GTGCTCGTAC GACTGAGTCA CAAACTCACC GTGAGATGGC AAGCGGCCTT 
TCTATGCCGA TTGGCTTCAA GAATGGTACG GATGGTAGCC TAGCAACCGC TGTTAACGCG 
ATGCAAGCGG CCTCTTCTAG CCACCGTTTC ATGGGTATTA ACCGTGAGGG CCAAGTAGCG 
CTACTAACTA CGCAAGGTAA CCCGAATGGT CACGTGATTC TGCGCGGCGG CAAGCAAACT 
AACTACGATT CAGTATCGGT TAACGAGTGT GAGCAAGAGA TGGCGAAGTC TGGCCTTGAT 
GCTTCATTGA TGGTGGATTG TAGCCATGCA AATTCTCGCA AAGATTACCG TCGTCAGCCA 
TTGGTTGCCG AAGACGTGAT TCACCAAATC CGTGAAGGTA ACAAGTCAAT CATCGGCTTG 
ATGATTGAAA GTCATATCAA TGAAGGTAAC CAATCTTCAG ACCTAGCACT TGAAGAGATG 
AAATACGGCG TATCGATCAC TGACGCATGT ATCAATTGGG ATTCAACTGA GGCACTATTA 
CGTCATGCAC ACGAAGAGCT GGTGCCTTTC TTAGAGAATC GCCTTAAAGG CTAA
 
Protein sequence
MQRSELSNIN ISEEQVLITP EELKVKLPLS EKARRFIQES RQTIADIIHK KDHRLLVVCG 
PCSIHDVEAA KDYAKRLKAL SEQLSDQLYI VMRVYFEKPR TTVGWKGLIN DPHLDGSFDI 
EHGLHVGRDL LAELAEMEIP LATEALDPIS PQYLADTFSW AAIGARTTES QTHREMASGL 
SMPIGFKNGT DGSLATAVNA MQAASSSHRF MGINREGQVA LLTTQGNPNG HVILRGGKQT 
NYDSVSVNEC EQEMAKSGLD ASLMVDCSHA NSRKDYRRQP LVAEDVIHQI REGNKSIIGL 
MIESHINEGN QSSDLALEEM KYGVSITDAC INWDSTEALL RHAHEELVPF LENRLKG