Gene VIBHAR_00991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00991 
Symbol 
ID5555144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp999062 
End bp1000045 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content49% 
IMG OID640906485 
Productbeta-hexosaminidase 
Protein accessionYP_001444217 
Protein GI156973310 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1472] Beta-glucosidase-related glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGACCGT TATGGGTTGA TGTTGCAGGC TATGAACTGA CTGCAGAAGA CAGAGAAATT 
TTGGAGCATC CAACGGTTGG TGGTTTGATT TTATTTACGC GTAACTACCA CGACAGCAAG
CAGCTTCAAG CTCTTACCCA ATCTATCCGC AAAGCGGCGA AACGTCCGAT CTTGATTGGT
GTTGACCAAG AAGGCGGGCG CGTTCAGCGT TTCCGTGAAG GTTTTTCTCT GATTCCTGCG
GCAGACGAAT ACGCCAAACA CCAAAACAGT GAAGAGCTGG CACGCATGGG CGGTTGGTTG
ATGGCAGCAG AGCTTATTGC TCATGACATC GACCTAAGCT TCGCACCAGT ACTAGATAAA
GGTCACCAGT GTAAAGCGAT TGGCAGCCGT GCCTTTGGTG AGGATCTGGA CACCATTTTA
CGTCACAGCA CCGCGTATAT GCAGGGCATG AAGAGTGTCG GTATGGCGAC GACGGGCAAA
CATTTCCCGG GCCATGGTGG CGTGATTGCT GATTCACACC TAGAGACACC ATACGACGAG
CGTAGCGATA TCTTTGAGCA AGATATGGCT ATCTTCAAAG CGCAAATCGA TGCTGGTATC
TTAGACGCGA TGATGCCTGC TCATGTGATT TTCCCAAATT ATGATGACCA ACCAGCAAGT
GGATCTGAGT ATTGGCTAAA ACAAATCCTA CGCCAGCAGC TTGGTTTTAA AGGTTTGATC
TTCTCTGATG ATTTGACCAT GGAGGGCGCT GCGATCATGG GTGGCCCTGC TCAGCGTGGC
GCACAAGCAT TAAACGCTGG CTGCGATATG CTGCTGGTCT GTAACAAGCG CGATGCGCAA
GTTGAGGTGC TGGATAATCT ACCAATCACT TCTGTTCCTC TAGCTGATGC CTTGTTGAAG
AAGCAAAGCT TTTCTCTAAG TGAGCTAAAA CGTTCGCAAG AGTGGAAAGA CGCTTCTGAA
GCTATGAAGC GATTGATTGG CTAA
 
Protein sequence
MGPLWVDVAG YELTAEDREI LEHPTVGGLI LFTRNYHDSK QLQALTQSIR KAAKRPILIG 
VDQEGGRVQR FREGFSLIPA ADEYAKHQNS EELARMGGWL MAAELIAHDI DLSFAPVLDK
GHQCKAIGSR AFGEDLDTIL RHSTAYMQGM KSVGMATTGK HFPGHGGVIA DSHLETPYDE
RSDIFEQDMA IFKAQIDAGI LDAMMPAHVI FPNYDDQPAS GSEYWLKQIL RQQLGFKGLI
FSDDLTMEGA AIMGGPAQRG AQALNAGCDM LLVCNKRDAQ VEVLDNLPIT SVPLADALLK
KQSFSLSELK RSQEWKDASE AMKRLIG