Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00975 |
Symbol | nhaR |
ID | 5554255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 981962 |
End bp | 982813 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640906469 |
Product | transcriptional activator NhaR |
Protein accession | YP_001444201 |
Protein GI | 156973294 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGTGTA AACAAGGCTC GGTAACAAAA GCTGCCGATG CATTATTCCT GACGCCACAA ACTGTGACAG GGCAGATTAA AGCACTTGAA GACCGTATGA AGGGGAAGTT GACCAAACGT AATGGTCGTA CGGTAGAGCC AACAGAGCTT GGACAGCTGG TATTTAAGTA CGCAGATCGC ATGTTTGGGT TGAGCTACGA AATGCTCGAT ATCGTCAACT ATAGCCAACA CTCCAATATC CTATTCGAAG TCGGCGTTGC CGATGCTCTC TCTAAACGTC TCGTCAGTAA AGTGCTGATG ACCACGGTTC CAGAGGATAA TAGTATTCAC TTACGTTGTT ATGAATCGAC TCACGAACTG TTGCTAGAGC GTTTATCGCA ACACAAGTTG GATATGATTC TTTCTGACTG CCCAGTAGAT TCGACGCAAA GCCCTGGTCT ATATAGTAAA AAGCTTGGTG AAAGCAGCAT GAGCTTTTTT GCTTCGTCAG AAATTCCAGA CGTCAAGTTC CCCGAAATCC TAGAGAAGAA AAAGCTACTT ATCCCAGCAA GCCGAACGGC AATGGGGCGA AAAGTACTGC AGTGGTTTGA TCGTCAAGGA TTGCAACCAG ATGTGTTGGG TGAATTTGAT GATGTGGCGT TAATGAAGGC CTTTGCTCGA TATCGCGATG ATGTCATTTT CTTAGCACCG ACGGTTTACA TGTCCGAGAT TGAGGACGAT CGCAATTTGC AATTAATTGG GCATGTTGAC GATTTGAAGG AAGAGTATTA CGTCATCTTT GCCGAGCGAA TGATACAACA TCCAGCAGTA AAGAACGTTT GTGATGCAGA TTTTAGCCAA ATGTTTGAAT GA
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Protein sequence | MVCKQGSVTK AADALFLTPQ TVTGQIKALE DRMKGKLTKR NGRTVEPTEL GQLVFKYADR MFGLSYEMLD IVNYSQHSNI LFEVGVADAL SKRLVSKVLM TTVPEDNSIH LRCYESTHEL LLERLSQHKL DMILSDCPVD STQSPGLYSK KLGESSMSFF ASSEIPDVKF PEILEKKKLL IPASRTAMGR KVLQWFDRQG LQPDVLGEFD DVALMKAFAR YRDDVIFLAP TVYMSEIEDD RNLQLIGHVD DLKEEYYVIF AERMIQHPAV KNVCDADFSQ MFE
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