Gene VIBHAR_00975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00975 
SymbolnhaR 
ID5554255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp981962 
End bp982813 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content44% 
IMG OID640906469 
Producttranscriptional activator NhaR 
Protein accessionYP_001444201 
Protein GI156973294 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGTGTA AACAAGGCTC GGTAACAAAA GCTGCCGATG CATTATTCCT GACGCCACAA 
ACTGTGACAG GGCAGATTAA AGCACTTGAA GACCGTATGA AGGGGAAGTT GACCAAACGT
AATGGTCGTA CGGTAGAGCC AACAGAGCTT GGACAGCTGG TATTTAAGTA CGCAGATCGC
ATGTTTGGGT TGAGCTACGA AATGCTCGAT ATCGTCAACT ATAGCCAACA CTCCAATATC
CTATTCGAAG TCGGCGTTGC CGATGCTCTC TCTAAACGTC TCGTCAGTAA AGTGCTGATG
ACCACGGTTC CAGAGGATAA TAGTATTCAC TTACGTTGTT ATGAATCGAC TCACGAACTG
TTGCTAGAGC GTTTATCGCA ACACAAGTTG GATATGATTC TTTCTGACTG CCCAGTAGAT
TCGACGCAAA GCCCTGGTCT ATATAGTAAA AAGCTTGGTG AAAGCAGCAT GAGCTTTTTT
GCTTCGTCAG AAATTCCAGA CGTCAAGTTC CCCGAAATCC TAGAGAAGAA AAAGCTACTT
ATCCCAGCAA GCCGAACGGC AATGGGGCGA AAAGTACTGC AGTGGTTTGA TCGTCAAGGA
TTGCAACCAG ATGTGTTGGG TGAATTTGAT GATGTGGCGT TAATGAAGGC CTTTGCTCGA
TATCGCGATG ATGTCATTTT CTTAGCACCG ACGGTTTACA TGTCCGAGAT TGAGGACGAT
CGCAATTTGC AATTAATTGG GCATGTTGAC GATTTGAAGG AAGAGTATTA CGTCATCTTT
GCCGAGCGAA TGATACAACA TCCAGCAGTA AAGAACGTTT GTGATGCAGA TTTTAGCCAA
ATGTTTGAAT GA
 
Protein sequence
MVCKQGSVTK AADALFLTPQ TVTGQIKALE DRMKGKLTKR NGRTVEPTEL GQLVFKYADR 
MFGLSYEMLD IVNYSQHSNI LFEVGVADAL SKRLVSKVLM TTVPEDNSIH LRCYESTHEL
LLERLSQHKL DMILSDCPVD STQSPGLYSK KLGESSMSFF ASSEIPDVKF PEILEKKKLL
IPASRTAMGR KVLQWFDRQG LQPDVLGEFD DVALMKAFAR YRDDVIFLAP TVYMSEIEDD
RNLQLIGHVD DLKEEYYVIF AERMIQHPAV KNVCDADFSQ MFE