Gene VIBHAR_00945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00945 
Symbol 
ID5553644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp949863 
End bp950543 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content47% 
IMG OID640906439 
Producturacil-DNA glycosylase 
Protein accessionYP_001444171 
Protein GI156973264 
COG category[L] Replication, recombination and repair 
COG ID[COG0692] Uracil DNA glycosylase 
TIGRFAM ID[TIGR00628] uracil-DNA glycosylase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAGT TACCCACTTG GCACGATGTA ATCGGCGAAG AAAAACAGCA GAGCTACTTT 
GTCGACACTT TGAATTTTGT TGAAGCAGAG CGAGCGGCGG GCAAAGCTAT CTATCCGCCA 
GCCAAAGACG TGTTCAACGC GTTTCGTTTT ACCGAGTTCA ATGACGTTAA GGTTGTGATT 
CTAGGACAAG ACCCTTACCA CGGCCCTAAC CAAGCACATG GTTTGTGCTT CTCTGTATTA 
CCAGGCATCA AAACCCCGCC GTCTTTGGTG AACATGTACA AAGAGCTGGC ACAGGACATT 
GAAGGTTTCC AAATTCCTCA GCATGGCTTT TTGCAAAGTT GGGCAGAGCA AGGGGTGTTG 
CTACTGAATA CTGTATTGAC GGTAGAGCAG GGTAAAGCAC ACTCGCATTC GAAAACTGGC 
TGGGAAACGT TTACTGACCG CGTTATTGAA GCCATTAACC AGCATCAAGA AGGTGTGGTG 
TTCTTGTTGT GGGGGTCACA CGCGCAGAAA AAAGGGCGTT TTATCGACCG TAATAAACAT 
CACGTGTTAA CGGCTCCGCA CCCGTCACCA TTATCTGCTC ACCGAGGATT TTTTGGCAGT 
AAGCCATTCT CACAAGCAAA CCAGATTCTT GTTCAGCAAG GGAAAGAAGT GATCAATTGG 
CATTTGCCAA TGACGGTATA A
 
Protein sequence
MNQLPTWHDV IGEEKQQSYF VDTLNFVEAE RAAGKAIYPP AKDVFNAFRF TEFNDVKVVI 
LGQDPYHGPN QAHGLCFSVL PGIKTPPSLV NMYKELAQDI EGFQIPQHGF LQSWAEQGVL 
LLNTVLTVEQ GKAHSHSKTG WETFTDRVIE AINQHQEGVV FLLWGSHAQK KGRFIDRNKH 
HVLTAPHPSP LSAHRGFFGS KPFSQANQIL VQQGKEVINW HLPMTV