Gene VIBHAR_00940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00940 
Symbol 
ID5553577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp944714 
End bp945685 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content49% 
IMG OID640906434 
Producthomoserine kinase 
Protein accessionYP_001444166 
Protein GI156973259 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0083] Homoserine kinase 
TIGRFAM ID[TIGR00191] homoserine kinase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTCAA GTGATATGGA TGTAGTGGCT TATGCCCCAG CATCAATTGG TAATGTAAGC 
GTTGGTTTCG ACGTTCTGGG GGCGGCGGTG TCCCCAGTTG ATGGCACACT ATTGGGCGAC 
CGAGTATTGG TTAAGTCCGG AAATGAGCCG TTCAGCCTAA AGACGGCGGG TGATTTTGTT 
GAGAAGCTGC CAACCGAGCC AAAAGAGAAC ATCGTTTACG ATTGTTGGGT CGTGTTTGCT 
CGTGAGCTAG ACAAAAAAGG CGTCGAGCTC AAACCACTTG AGATGACGTT AGAAAAGAAC 
ATGCCAATCG GCTCTGGTTT AGGCTCAAGC GCATGTTCTA TCGTTGCGGC ATTAGATGCA 
TTGAACCGAT TCCATGGACA GCCGCTTGAC GAGACAGAGT TACTGGCGCT GATGGGAGAA 
ATGGAAGGCA AGATCTCTGG TGGTATTCAC TACGACAACG TCGCGCCGTG TTACCTTGGC 
GGTGTGCAAT TGATGCTTGA AGAGTTGGGT ATCATTAGCC AAGAAGTGCC TTGCTTTGAC 
GATTGGTTCT GGGTGATGGC GTATCCGGGT ATCAAAGTAT CAACTGCAGA AGCGCGTGAG 
ATCCTACCAT CTCAATACCG CCGACAAGAT ATCATTGCTC ATGGTCGTCA CCTTGCGGGC 
TTTATTCATG CGTGTCATTC TGGTCAGCCA GAACTCGCTG CAAAAATGAT CAAAGACGTG 
ATCGCAGAAC CGTATCGTGA GAAACTGCTT CCTGGCTTTG CGAATGCACG TCAATACGCA 
GCGTCTGCGG GTGCATTGGC AACCGGTATT TCTGGCAGTG GTCCGACACT GTTCAGTATC 
TGCAAAGAGA AAGATGTCGC TGAGCGAGTT GCTCGCTGGT TAGAACAGAA CTACGTACAA 
AACGAAGAAG GATTCGTCCA CGTTTGTCGT CTAGATAAAC AGGGTTCGAA AGTAACAGGA 
AGTGAGCTAT GA
 
Protein sequence
MSSSDMDVVA YAPASIGNVS VGFDVLGAAV SPVDGTLLGD RVLVKSGNEP FSLKTAGDFV 
EKLPTEPKEN IVYDCWVVFA RELDKKGVEL KPLEMTLEKN MPIGSGLGSS ACSIVAALDA 
LNRFHGQPLD ETELLALMGE MEGKISGGIH YDNVAPCYLG GVQLMLEELG IISQEVPCFD 
DWFWVMAYPG IKVSTAEARE ILPSQYRRQD IIAHGRHLAG FIHACHSGQP ELAAKMIKDV 
IAEPYREKLL PGFANARQYA ASAGALATGI SGSGPTLFSI CKEKDVAERV ARWLEQNYVQ 
NEEGFVHVCR LDKQGSKVTG SEL