Gene VIBHAR_00907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00907 
SymbollpxC 
ID5555402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp900901 
End bp901818 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content44% 
IMG OID640906401 
ProductUDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 
Protein accessionYP_001444133 
Protein GI156973226 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase 
TIGRFAM ID[TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAGAC AACGTACTCT GAAAGAAATA GTGAAAACAA CTGGTGTGGG TCTCCACTCT 
GGTCGTAAAG TCACACTTAC TCTGCGCCCA GCTGCTGCTA ATACAGGTAT CATTTACCGT 
CGTACAGATG TAAACCCACC TGTAGATTTT CCAGCTGATC CAGCGTCTGT TCGTGACACT 
ATGCTATGTA CAGCACTAGT GAACGACGAA GGCGTGCGTA TTTCAACTGT TGAACATTTG 
AACGCGGCAC TTGCTGGTAT GGGCATCGAC AACATTATTG TTGAAGTTGA CGCACCTGAA 
ATTCCAATCA TGGATGGTAG CGCTAGCCCA TTCGTATACT TGCTACAACA AGCAGGTATC 
GAAACGCAAA ATGTGCCTAA GCGTTTTATC CGTATTAAGA AACCTGTTCG TTTTGAAGAT 
GGCGATAAGT GGGCAGAGTT TGTTCCATTT AACGGCTTCC GTATGGACTT TGAAATTGAA 
TTCAACCACC CAGCGATCGA ATCAGACGAG CAACGTCTTC TGTTTGATTT CTCATCTCAA 
GGCTTCGTTC GCGAGATTTC TCGTGCACGT ACATTTGGTT TCATGCGTGA TATCGAATAT 
CTACAATCTC AGAACCTAGT TCTTGGTGGT AGCTTTGATA ACGCAATCGT ACTGGATGAT 
TACCGCATTC TTAACGAAGA AGGCCTACGC TTTGATAACG AGTTTGTTAC TCACAAATTA 
TTGGACGCGA TTGGTGATCT TTACATGTGT GGTCACGCAA TTATCGGTGA ATTCCGTGCG 
TTCAAATCAG GTCATGGTCT AAACAACCAA CTTCTACGTG CTGTTCTTGC TGATCAAGAA 
GCATGGGAAT GGACAACGTT CGAAGAAGAA GAAGGTTCGC CAGTCGCATT TGCACAACCA 
AATATGGTTC TAGCGTAA
 
Protein sequence
MIRQRTLKEI VKTTGVGLHS GRKVTLTLRP AAANTGIIYR RTDVNPPVDF PADPASVRDT 
MLCTALVNDE GVRISTVEHL NAALAGMGID NIIVEVDAPE IPIMDGSASP FVYLLQQAGI 
ETQNVPKRFI RIKKPVRFED GDKWAEFVPF NGFRMDFEIE FNHPAIESDE QRLLFDFSSQ 
GFVREISRAR TFGFMRDIEY LQSQNLVLGG SFDNAIVLDD YRILNEEGLR FDNEFVTHKL 
LDAIGDLYMC GHAIIGEFRA FKSGHGLNNQ LLRAVLADQE AWEWTTFEEE EGSPVAFAQP 
NMVLA