| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_00898 |
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| Symbol | |
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| ID | 5554092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | + |
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| Start bp | 889740 |
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| End bp | 891104 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640906392 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanyl ligase |
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| Protein accession | YP_001444124 |
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| Protein GI | 156973217 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCACAG TAACGCTTTC TCAAATTGCC GACATTACTG GCGGTGAACG GGTTGGTAAC
GATCTTTCTA TTGAATCTGT TTCGACCGAC ACTCGATCTA TCGAACAAGG CGCTCTATTT
GTTGCTTTGG TTGGAGAGCG TTTTGATGCT CACGACTTCT GCCAACAAGC AGTAGAGTCG
GGCGCGGGCG CACTATTGGT ACAAAAACGC GTTAATGTGA ATGTGCCTCA AGTCGTTGTC
GGCGATAGTA AGGTAGCATT GGGGCAAGTG GCAGCTTGGG TTCACCAAAC ATGCCAAACG
CCGACGGTCG CCATTACAGG TAGCTGTGGT AAAACCACGG TAAAAGAGAT GGTTGCCAGT
ATTTTGCAGT TGAAAGGTAA AGTGCTGTTT ACTGCGGGCA ACTTCAACAA CGACATTGGT
GTGCCATTGA CCTTGCTGCG TTCGCAACAA GACGATGACT ACGCGGTGAT CGAGTTGGGT
GCGAACCACA TTGGTGAAAT TGAGTACACC ACGCAATTAG TTAAGCCAGA CATTGCCATG
GTAAACAACG TGGCTGCTGC TCACCTTGAA GGTTTCGGGT CTATCGATGG CGTGAAACAA
GCTAAAGGTG AAATCTACCA AGGGCTAGCG GCTGGCGGTA TTGCGATCGT AAACCTAGAT
AGCAATGGCG GAGCGAAGTG GGATGAAGTA TTAGCAGATA AGAATGTGAT TACTTTTTCA
CAAAGTAACG CGGACGCTGA CTTTTACGCT TCCAACATCG TGATGAGCGC CGCAGGTGAG
GCAAGCTTTG ACTTACATAT CGCTGCAACT TCACAAGAAA TTGAACTGTC TCTGGGTATT
ATTGGTCAAC ACAACGTGGC TAATGCAATT GCTGCTTCTA TCATTGCCTT GAAAATGGGG
GCGACATTAG AAGAGATTCG TTCAGGCCTT AAGCACTTAA ACAAGGTAAA AGGTCGTGTT
GAAGTGGAAG AGTTGAGCGA TAAAATCAAG CTTATTGATG ACAGCTACAA CGCTAGCGTT
CCTGCTATGA AGGCGGCGGT CGATTTACTA GCGGCATTCC AAGGCCAACG TTGGTTGATT
TTAGGTAATA TGGCGGAGTT GGGTGAGGAA AGTCTTGCAC TTCACCGTCA AGTCGGGGAA
CATGCTGCCC CACAAAAATT TGAACATGTT CTCACGTATG GTGCGGATGC AAAGGTCATT
AGCGAGCTTT GCGATGGCAT CCATTTCGAG ACACATCAAG AGATGATTGA CTACATCAAG
CAGCATCTAG ACCAAGCGGT TCCTGAACAC CACACGATGT TGGTGAAAGG CGCGAACGGT
GCACGTATGT TTGAAGTCGC TGCTGCTTTG AAGGAGTACT ATTAA
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| Protein sequence | MITVTLSQIA DITGGERVGN DLSIESVSTD TRSIEQGALF VALVGERFDA HDFCQQAVES
GAGALLVQKR VNVNVPQVVV GDSKVALGQV AAWVHQTCQT PTVAITGSCG KTTVKEMVAS
ILQLKGKVLF TAGNFNNDIG VPLTLLRSQQ DDDYAVIELG ANHIGEIEYT TQLVKPDIAM
VNNVAAAHLE GFGSIDGVKQ AKGEIYQGLA AGGIAIVNLD SNGGAKWDEV LADKNVITFS
QSNADADFYA SNIVMSAAGE ASFDLHIAAT SQEIELSLGI IGQHNVANAI AASIIALKMG
ATLEEIRSGL KHLNKVKGRV EVEELSDKIK LIDDSYNASV PAMKAAVDLL AAFQGQRWLI
LGNMAELGEE SLALHRQVGE HAAPQKFEHV LTYGADAKVI SELCDGIHFE THQEMIDYIK
QHLDQAVPEH HTMLVKGANG ARMFEVAAAL KEYY
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