Gene VIBHAR_00891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00891 
Symbol 
ID5554128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp881245 
End bp883056 
Gene Length1812 bp 
Protein Length603 aa 
Translation table11 
GC content48% 
IMG OID640906385 
Producthypothetical protein 
Protein accessionYP_001444118 
Protein GI156973211 
COG category[R] General function prediction only 
COG ID[COG3107] Putative lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAACC ATAAGAGACT CAGTGTACCA CGCTTACTCA CTCCTGTTGC ACTGGCAATT 
ACGCTCGCAG CCTGTTCTTC AGGCCCGCGA CAACCAGACA GCGTAGACAT TACACTTGAG
CCGACACAGT CTGTTCAGAA CTACATGATT CAAGCGGATA GCACCGAAGG CAGCTTGCAA
AACGACTGGT TGATCATGGC GACCAAAGCA GCCATCCAAG CAAACGAATT GGATCAAGCT
GAACTGCTGA TCAAACGTCT TTCTCGTCAA CAATTGACCG AAGTTCAACA AGCCGAGTGG
CAATTAGCCC GTGCGACCAT ACAGCAAAAG CAAGGCAATT ACTCTCAATT GCTACAAACA
CTGAACTTTA AACCTTGGTG GAAACTACCG AGCGAACAGT GGAAAGACTA TTATGAGCTG
CGTGCGGATG CTTACCAAAG CTTGAACCAA CCATTCGAAG CAAACCGCCA GCTAGTCGCA
CAAGGTCAAT ATGCTTCGTC TGCCGAGCAA CGTGAAATCT CTAGCCGTAT TTGGATGAAC
TTTGGCAGCT ACTCAGAGAA CGAACTGACA TCACTGCAAA CCGAACCAAA CGAAGATGTG
CTTGATGGCT GGTTACAGCT AGCTATTTAT GCAAAGACGC TTTCAAGTAA TATTCCTCAG
CTGAAAAACA CCCTTGAGCG CTGGCTAAGT GAAAACCCTT CACACCCAGC AGCCGTTTAC
ACACCCGCTG AAATCCAAAA CATCTTATCT TTAGAAATCG TTAAGCCAAA CAACACGGCG
CTACTGTTGC CTCTAACTGG TAAGTTTGCT CCGCAAGCTC AGTTGATCCG TGATGGCTTC
ATTTTTGCGA TGATGAACGA TGGCATGCGC GAGCCGAGCG CAACCTTAAC AGTCATTGAT
ACCCACGCTT ACAGTGCGGA TCAAATCAAG CAACGCCTGA TCAACGAGAA CATCGATTTT
GTTGTGGGTC CTCTGCAAAA AGAAAACGTA GAGAAACTAC AAGCGACCTT TGATGGTTCT
GAAACTGGCG TAAAAATCCC AGCTCTTGCA TTGAACATTC CTGAAGACGT TCAACCGGGT
ACTGACATGT GTTACCTAGC ACTGTCTCCA GAGCAAGAAG TGGCGCAAGC GGCGAAGTAC
TTGTTCAATC AAGGCTACCA ATTCCCAATG ATTTTGGCAC CGAGCGGTGC TTACGGTCAG
CGCGTGGTTG AAGCGTTTAA TGAAGAATGG CGCAAGTACA GCCCAAACAA AGTGGCTTCA
AGCTATTTTG GTGACAAACG CCAGCTGCAG AAGAACATCA ACAACGTATT TGGCCTACAA
GAAAGCCAAC AGCGTATCGC ACAAATGCAG TCTCTGATGC GCATTTCATT AGAAAGCCCA
CCACGTAGCC GTCGTGATGT GGACGCGGTT TACATTGTTG CTCGTAGCTC TGAACTCACG
CTAATCAAGC CATTTATTGA AGTGGCGATT AACCCTGATG CGAAGCCACC TAAACTATTC
TCCAACTCAC GCAGTAACAG CGGTGGTGCG ACGTATGAAG ACCTTTCTGG TGTAGCATAC
AGCGACATTC CGATGTTGAT TAACCCAGCT CCAACCATCG CGGCAGAAAT GAATGAGCTA
TGGGCAGATC AATCCAACAT GGAAAAACGC CTTGAAGCGC TAGGTATGGA TGCATACAAG
CTGATCGGTG AGCTACCACA AATGAAGCTT CTACCGGGTT ACTCGGTTAG CGGTCAAACT
GGTGTGCTAA GCATTAACAA CAATTGTGTT GTTGAGCGTG AGCTAGACTG GGCTGAGCGT
GGGGCTCTTT AG
 
Protein sequence
MMNHKRLSVP RLLTPVALAI TLAACSSGPR QPDSVDITLE PTQSVQNYMI QADSTEGSLQ 
NDWLIMATKA AIQANELDQA ELLIKRLSRQ QLTEVQQAEW QLARATIQQK QGNYSQLLQT
LNFKPWWKLP SEQWKDYYEL RADAYQSLNQ PFEANRQLVA QGQYASSAEQ REISSRIWMN
FGSYSENELT SLQTEPNEDV LDGWLQLAIY AKTLSSNIPQ LKNTLERWLS ENPSHPAAVY
TPAEIQNILS LEIVKPNNTA LLLPLTGKFA PQAQLIRDGF IFAMMNDGMR EPSATLTVID
THAYSADQIK QRLINENIDF VVGPLQKENV EKLQATFDGS ETGVKIPALA LNIPEDVQPG
TDMCYLALSP EQEVAQAAKY LFNQGYQFPM ILAPSGAYGQ RVVEAFNEEW RKYSPNKVAS
SYFGDKRQLQ KNINNVFGLQ ESQQRIAQMQ SLMRISLESP PRSRRDVDAV YIVARSSELT
LIKPFIEVAI NPDAKPPKLF SNSRSNSGGA TYEDLSGVAY SDIPMLINPA PTIAAEMNEL
WADQSNMEKR LEALGMDAYK LIGELPQMKL LPGYSVSGQT GVLSINNNCV VERELDWAER
GAL