Gene VIBHAR_00888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00888 
Symbol 
ID5556147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp879615 
End bp880274 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content47% 
IMG OID640906382 
Producthypothetical protein 
Protein accessionYP_001444115 
Protein GI156973208 
COG category[R] General function prediction only 
COG ID[COG2823] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACGTA GTCTTGTCAT TTTATGTGCC GCGCTCAGCA TGAGCGGCTG TGCAGGTTTG 
TTTATTGCAG GTGCAGCCAC TACGGCTAAT ATCGTCACGG ATACCCGTAC CACCAAAGAA 
ATTTGGCAAG ACAACAACAT TGAATTCGAA GTCGCAGCGA TCGGGAATAA AGCACCTTTT 
AAAGGAAAAG CCCGCGTCGT TGCTAGCTCA TACAATGGCA CCGTAGTCCT AATGGGCCAA 
GCTCCTACTC AAGACTTGAT TAACGAGTTT GAAAACAAGG CTCGTGAAGT GAAAGGTGTG 
AAGAACATTC ACAACCAAAT CAGACAGAAA GAGCCTCTCA GCGTCACACA AATCAGCAAC 
GACAGTTGGA TCACCACCAA AGTGAAGTCT GCGCTGCTGA CGGACAGTGA GCTCAACGGT 
GTGAAAGTGA AAGTCATCAC CGAAGACAGC GACGTGTTCC TATTTGGTTA CGTAACACCA 
GAACAAAGCG AGAGAGCAAC GGAGATTGCA CGTAATATTT CTGGCGTGAA GCAGGTCGTC 
AAGGGCTTCC AGTATGGCGA TGAAAAACCG TTAGAAGTAG AAGAGCCAGA AGCAGCGAAC 
TCTGAGACGG CAGTGGCAGA AGAAGTCACT GTGAAAGAAA TAGATGGACA AGCAAACTAA
 
Protein sequence
MIRSLVILCA ALSMSGCAGL FIAGAATTAN IVTDTRTTKE IWQDNNIEFE VAAIGNKAPF 
KGKARVVASS YNGTVVLMGQ APTQDLINEF ENKAREVKGV KNIHNQIRQK EPLSVTQISN 
DSWITTKVKS ALLTDSELNG VKVKVITEDS DVFLFGYVTP EQSERATEIA RNISGVKQVV 
KGFQYGDEKP LEVEEPEAAN SETAVAEEVT VKEIDGQAN