Gene VIBHAR_00886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00886 
SymbolsspA 
ID5556501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp878377 
End bp879012 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content44% 
IMG OID640906380 
Productstringent starvation protein A 
Protein accessionYP_001444113 
Protein GI156973206 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGTAG CTGCCAATAA ACGTTCTGTG ATGACTCTTT TCTCAAGTGC ATCAGATTTG 
TATAGCCATC AGGTTCGCAT CGTACTAGCT GAAAAAGGCG TAAGTGTTGA AGTTGAGCTT 
GTTGATGAAG CTAACCTTCC TGCTGAGCTT GTTGAATTAA ACCCATACAA ATCAGTGCCA 
ACTCTTGTTG ACCGTGAGCT AGCTCTTTAC GATTCAAAAA TCATCATGGA GTACCTGGAC 
GAGCGTTTCC CTCATCCACC TCTAATGCCT GTTTACCCAG TTGCTCGTGG TAACAGCCGT 
CTGATGATGT ACCGTATTGA ACGCAACTGG TACTCACTCG CTGAAAAAGT TGTTAAGGGT 
AACGCTGAAG AATCAGAAAA AGCACGTACT AAACTACGTA ATGATCTTCT GACTCTTGCA 
CCAATCTTTG CTGAGTACGA GTACTTCATG AGCGAAGAGT TCAGCCTAAT CGATTGTTAC 
CTAGCTCCAC TATTGTGGCG TCTGCCTCAA CTAGGTATCG AGCTTGTAGG CCCTGGTTCA 
AAAGAGATCA AAGTTTACAT GAACCGCGTA TTTGAACGTG ATTCATTCCT TGCATCTCTA 
ACTGAAGCTG AACGTGAAAT GCGCCTAGTT CGCTAA
 
Protein sequence
MAVAANKRSV MTLFSSASDL YSHQVRIVLA EKGVSVEVEL VDEANLPAEL VELNPYKSVP 
TLVDRELALY DSKIIMEYLD ERFPHPPLMP VYPVARGNSR LMMYRIERNW YSLAEKVVKG 
NAEESEKART KLRNDLLTLA PIFAEYEYFM SEEFSLIDCY LAPLLWRLPQ LGIELVGPGS 
KEIKVYMNRV FERDSFLASL TEAEREMRLV R