| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_00878 |
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| Symbol | |
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| ID | 5553798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | - |
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| Start bp | 870738 |
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| End bp | 872105 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640906372 |
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| Product | protease |
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| Protein accession | YP_001444105 |
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| Protein GI | 156973198 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGC CATTGCTTGC GTTAACCGTT CTTTCTTTAA GCTTGGGTTC AATCATCACC
CCAGTTACCG CAACCGCGGC ACTTCCACTT AGTGTGGATG GGGAGCAGTT ACCTAGTCTT
GCCCCTATGC TCGAAAAAGT CACCCCTGCA GTTGTGAGCA TTGCGGTGGA AGGGAAACAA
GTGCAAACCA GCCGTATCCC GGAGCAGTTT CAGTTCTTCT TTGGCCCTGA ATTCCCAACA
GAGCAGACCC GAGAACGCCC ATTTAGAGGT TTAGGTTCTG GTGTCATCAT TGATGCGAAA
AAAGGCCAAA TCGTCACAAA CTACCACGTG ATTAAAGGCG CGGATGAAAT TCGTGTCCGC
TTGTACGATG GCCGTGAGTA TGATGCTGAA CTAGTCGGTG GCGATGAGAT GTCAGATATC
GCGCTGCTTA AACTCGAAAA AGCCAAAGAC CTAACACAAA TTAAAGTCGC TGATTCAGAC
TCTCTGCGTG TCGGTGACTT TACTGTGGCG ATCGGTAACC CATTTGGTTT AGGCCAAACG
GTCACATCCG GTATTGTATC GGCACTTGGT CGAAGCGGCT TGAACGTCGA GAACTTTGAA
AACTTCATCC AGACCGATGC CGCAATTAAC AGCGGTAACT CAGGCGGCGC TTTGGTTAAC
CTTAACGGTG AACTGATCGG CATCAACACG GCAATTCTTG GTCCAAATGG CGGTAACGTG
GGTATTGGCT TTGCAATTCC GTCCAACATG ATGAAGAACT TAACCGATCA GATCTTAGAG
TTCGGTGAAG TGAAACGCGG CATGCTCGGT GTTCAAGGGG GCGAAGTGAC CTCAGAGCTT
GCTGAAGCAC TGGGTTATGA GTCAAGCAAA GGCGCTTTCG TCAGCCAAGT GGTACCCGAC
AGCGCGGCAG ATAAAGCAGG CCTGAAAGCA GGTGACGTGA TTGTTTCTTT GAACGGTAAA
GCGATTGATA CCTTCTCTGA GCTTCGTGCA AAAGTCGCAA CGCTTGGTGC TGGTAAAAAA
ATCACACTTG GAGTGATCCG CGATGGTAAG CAAAAAGTTT TCGATGTAAC GTTAGGTGAA
TCAACGAATG TGAAAGCGAA AGCGGAAACA CTGCATGAAG GCCTAAAAGG TGCAGAGCTA
AGTAACACCA CGCCAAGTGA CAAGATCCAA GGTGTGAAGG TCACTAGCGT TGCGGAGAAC
TCTCCTGCAG CTCAATACCA GCTAGCACAA GATGACATCA TTATTGGTGT GAACCGAAAA
CGCGTGAAGA ACCTTGCCGA ACTGCGTGCG ATTGTTGAAA AGCACAAAGG TGTGCTGGCA
ATCAATGTTC AACGTGGTGA TCGCACGGTT TACTTGGTTA TCCGTTAA
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| Protein sequence | MKKPLLALTV LSLSLGSIIT PVTATAALPL SVDGEQLPSL APMLEKVTPA VVSIAVEGKQ
VQTSRIPEQF QFFFGPEFPT EQTRERPFRG LGSGVIIDAK KGQIVTNYHV IKGADEIRVR
LYDGREYDAE LVGGDEMSDI ALLKLEKAKD LTQIKVADSD SLRVGDFTVA IGNPFGLGQT
VTSGIVSALG RSGLNVENFE NFIQTDAAIN SGNSGGALVN LNGELIGINT AILGPNGGNV
GIGFAIPSNM MKNLTDQILE FGEVKRGMLG VQGGEVTSEL AEALGYESSK GAFVSQVVPD
SAADKAGLKA GDVIVSLNGK AIDTFSELRA KVATLGAGKK ITLGVIRDGK QKVFDVTLGE
STNVKAKAET LHEGLKGAEL SNTTPSDKIQ GVKVTSVAEN SPAAQYQLAQ DDIIIGVNRK
RVKNLAELRA IVEKHKGVLA INVQRGDRTV YLVIR
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