Gene VIBHAR_00877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00877 
Symbol 
ID5553815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp869466 
End bp870533 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content47% 
IMG OID640906371 
Productprotease 
Protein accessionYP_001444104 
Protein GI156973197 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID[TIGR02038] periplasmic serine pepetdase DegS 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAGCT TTTTGTTACG TTCTGTCTTT TTAGGCTTAG CAACTGCCGT CATTGTATTA 
CTCGCCGTTC CATCTTTGCG CAGCAATGTC ATCCCAACCG CACTTGTTGA TCCACAACCA 
AGCAACATCG CGTCACTCGA GGTGTCTTTT AACCAAGCGG TAAGAAAGGC AGCGCCCGCG 
GTAGTGAATA TCTACAGCCG TAAGTATGTG GAAAATGACC GCAGCAAGCT TTCAACTCAA 
GGCTTGGGCT CTGGCGTTAT TGTTAGCGAA AAAGGCTACA TCATTACTAA CTACCACGTA 
GTGGCTCAAG CTGACCAAAT CGTGGTTGCG CTACAAGATG GCCGCGTCGC TGCAGCTCAA 
TTGGTTGGTA CTGATAAGCA TACGGACATT GCGATCCTAC GTGTCGAAGG TTCTAACCTT 
CCTGTTATCC CACTCAATCC AGAATACAAA CCTCGAGTTG GTGATGTCGT CCTAGCAATT 
GGCAACCCGT ACAACTTAGG TCAAACCACC ACATTCGGCA TTATTTCAGC AACAGGTCGT 
TGGTCAATCA GTGATGGTCG CCAAGCCTTT ATCCAAACCG ATGCAGCAAT CAACGAAGGT 
AACTCGGGGG GTGCTTTGGT CAACACGCAA GGTGAATTGG TAGGCATAAA TACGGCTTCA 
TTCCAACAGG CGACAGACCT TGAGACCTAC GGCATCTCCT TTGCAATTCC AGCCCCTATA 
GCAAACAAGA TCATGCAGAA AATCATCGCA GATGGTCGTG TAATCCGAGG CTACATTGGT 
ATTGATGGGC AAGATATTAA TGCGGTAACT GCTCGCTTGT TAGGTAACGA ACACATTGGT 
GGCATCGTGG TGTTAGGCAT TGACCCGAAT GGTCCTGCGA GTGATGCTGG TTTTGAGAAA 
CAAGACATCA TCATCAGTAT TAACGGTACG AAAGTTCAAG GACTCCAAAG CGTGATGGAC 
ATCGTCACTG ACCTACGTCC GGGCACCTCC GTCGATATTG GCATTATCCG CAAGGGTAAA 
GAAATGAACT TAAAAGTCAC CATCGCCGAA GACAAACAAG AAGCATAA
 
Protein sequence
MLSFLLRSVF LGLATAVIVL LAVPSLRSNV IPTALVDPQP SNIASLEVSF NQAVRKAAPA 
VVNIYSRKYV ENDRSKLSTQ GLGSGVIVSE KGYIITNYHV VAQADQIVVA LQDGRVAAAQ 
LVGTDKHTDI AILRVEGSNL PVIPLNPEYK PRVGDVVLAI GNPYNLGQTT TFGIISATGR 
WSISDGRQAF IQTDAAINEG NSGGALVNTQ GELVGINTAS FQQATDLETY GISFAIPAPI 
ANKIMQKIIA DGRVIRGYIG IDGQDINAVT ARLLGNEHIG GIVVLGIDPN GPASDAGFEK 
QDIIISINGT KVQGLQSVMD IVTDLRPGTS VDIGIIRKGK EMNLKVTIAE DKQEA