Gene VIBHAR_00875 details

Gene Information

• Locus tag: VIBHAR_00875
• ID: 5556275
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: +
• Start bp: 865256
• End bp: 867136
• Gene Length: 1881 bp
• Protein Length: 626 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640906369
• Product: DNA topoisomerase IV subunit B
• Protein accession: YP_001444102
• Protein GI: 156973195
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
• TIGRFAM ID: [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTGAAC AATATAATGC TGGTGCCATT GAAGTACTGA ATGGCTTAGA GCCAGTACGT 
CGCCGACCAG GGATGTATAC GGATACAGCG CGCCCAAACC ACTTGGGCCA AGAAGTTATC 
GATAACAGTG TCGATGAAGC GCTAGCCGGA CATGCCTCAA AAGTACAAGT CATCCTACAT 
GCTGACCAAT CACTAGAAGT GATCGATGAT GGTCGAGGCA TGCCTGTTGA TATCCACCCA 
GAAGAGAAGG TATCAGGTGT TGAACTGATC CTATGTAAGC TTCACGCAGG TGGTAAATTC 
TCTAATAAGA ACTACCAATT CTCTGGTGGT CTACACGGTG TAGGTATCTC AGTAGTAAAC 
GCGTTGTCCA AGCGTGTTGA AGTGACGGTC CGTCGTGACG GTCAAGTGTA TGAGATTGCT 
TTTGAACACG GTGATAAGGT TTCTGACCTA ACGGTTACGG GCACATGTGG CCGTCGCAAC 
CGTGGTACCA GTGTACACTT CTGGCCAGAT GCAAAGTACT TTGATTCTGC AAACTTCTCG 
GTAACACGTT TGGTGAATAA CCTACGTGCG AAAGCAGTAC TTTGCCCGGG TCTAGAGATT 
ACGTTTACCG ATAAAGTAAA CAACAAAGAC TACAAATGGC ACTACGAAGA TGGTCTTAAA 
GACTATCTAG CGGAAGGTGT GAAAGGTTAT CCAGTTCTCC CTGAAGAACC ATTTACTGGT 
GAGTTCTCAG CAGAAACTGA AGCAGCAAAC TGGGCGGTGA TCTGGCAGCC AGAAGGCGGC 
GAGATGATCA CGGAAAGTTA CGTGAACCTT ATCCCAACCG CACAGGGTGG TACGCACGTT 
AATGGCCTGC GCCAAGGCTT GCTTGATGCA ATGCGTGAGT TCTGTGAATT CCGTAACTTA 
TTGCCTCGTG GCGTGAAGCT AACGGGTGAT GACGTTTTCG ACCGCTGTTC TTACGTTCTG 
TCAGTTAAGA TTCAAGATCC GCAATTTGCC GGTCAGACCA AAGAGCGTCT GTCTTCTCGT 
CAGACGGCTG CCTTTGTCTC TGGTGTCGTA AAAGACGCAT TCAGCCTTTG GTTGAACGAA 
AAGCCGCAGC TGGCTGAACA GTTAGCGGAA GTGTGTATCG CTAACGCACA CCGTCGTATG 
CGCGCGAGCA AAAAGGTTGT ACGTAAGAAG GTCGCATCAG GTCCTGCACT ACCAGGTAAA 
CTGACCGACT GTTCTGTACA AGACCTTAAC CGCACCGAAA TCTTCTTCGT AGAGGGTGAC 
TCGGCGGGTG GTTCTGCTAA ACAAGCACGT GATCGTGAGT TCCAAGCGGT GATGCCACTG 
CGCGGTAAGA TCCTGAATAC GTGGGAGGTC TCTGCAGACC AAGTGCTTGC ATCTCAAGAG 
GTGCACGACA TCTCAGTTGC TTTGGGTATC GACCCAGACA GTGACAACCT AGACAGCCTG 
CGTTACGGTA AGATCTGTAT CCTTGCCGAT GCGGACTCGG ATGGTCTACA CATCGCAACG 
CTGTTATGTG CACTGTTCAC GCGTCACTTC CGTGCGCTGG TTGAAGCTGG TCATATCTAC 
GTAGCCATGC CGCCTCTGTA CCGTATCGAC TGTGGCAAAG AAGTATTCTA TGCCCTAGAC 
GATGACGAAA AAGATGGCGT ACTAGAGCGC TTGTCGAAGA AGAAAGCCAA AATCAACGTG 
CAACGATTCA AAGGTCTGGG TGAGATGAAC CCACTTCAGT TGCGCGAAAC AACCATGGAT 
CCAAACACGC GTCGTCTGGT TCAGTTAACC ATTGATGACT CGGTGGCGAC CATGGAAATG 
ATGGACATGC TGCTTGGTAA GAAACGAGCA GATGATCGTC GTTCTTGGCT ACAAAACAAC 
GGCGATATGG CAGAGGTTTA A 

 

Protein sequence

MTEQYNAGAI EVLNGLEPVR RRPGMYTDTA RPNHLGQEVI DNSVDEALAG HASKVQVILH 
ADQSLEVIDD GRGMPVDIHP EEKVSGVELI LCKLHAGGKF SNKNYQFSGG LHGVGISVVN 
ALSKRVEVTV RRDGQVYEIA FEHGDKVSDL TVTGTCGRRN RGTSVHFWPD AKYFDSANFS 
VTRLVNNLRA KAVLCPGLEI TFTDKVNNKD YKWHYEDGLK DYLAEGVKGY PVLPEEPFTG 
EFSAETEAAN WAVIWQPEGG EMITESYVNL IPTAQGGTHV NGLRQGLLDA MREFCEFRNL 
LPRGVKLTGD DVFDRCSYVL SVKIQDPQFA GQTKERLSSR QTAAFVSGVV KDAFSLWLNE 
KPQLAEQLAE VCIANAHRRM RASKKVVRKK VASGPALPGK LTDCSVQDLN RTEIFFVEGD 
SAGGSAKQAR DREFQAVMPL RGKILNTWEV SADQVLASQE VHDISVALGI DPDSDNLDSL 
RYGKICILAD ADSDGLHIAT LLCALFTRHF RALVEAGHIY VAMPPLYRID CGKEVFYALD 
DDEKDGVLER LSKKKAKINV QRFKGLGEMN PLQLRETTMD PNTRRLVQLT IDDSVATMEM 
MDMLLGKKRA DDRRSWLQNN GDMAEV