Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00872 |
Symbol | |
ID | 5554293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 863559 |
End bp | 864365 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640906366 |
Product | cyclic 3',5'-adenosine monophosphate phosphodiesterase |
Protein accession | YP_001444099 |
Protein GI | 156973192 |
COG category | [R] General function prediction only |
COG ID | [COG1409] Predicted phosphohydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCGATCAT CTAGTGACAG CATAAAGCTA TTACAAATCA CGGATACTCA CCTGTTTGAG GCAGATGAGG GCAGTTTGCT GAGCGTAAGA ACCGCTGACA GCTTCGCAGC CGTGGTACAA GAGATTCTTA ATCACCAAGT GCAGTATGAA TACATTTTGG CAACGGGTGA TATTTCACAA GACCATAGTG CCGAGTCTTA CCAGCGTTTT GCTGAGGGTA TCGCGCCGCT GAAAAAAGAT TGTTTCTGGC TTCCAGGCAA CCACGACTAC AAGCCAAATA TGGGCAGTGT ACTGCCATCT CCTCAAATTC AAGCTGCTGA GCATGTGATG CTTGGTGAGC ATTGGCAGTT AGTCTTATTG GATTCACAAG TGGTGGGTGT ACCCCACGGA CGTTTGAGTG ACCAACAGTT AGCACTGTTA GAAGAAAAAC TGGCAGAAAA CCCGCAAAGA CATACCTTGG TGCTATTACA CCACCACCCA TTGTTGGTAG GAAGTGCTTG GTTAGATCAG CATGCATTGA AAGATGCGGA TGCTTTCTGG CAAGTGGTGG ACCGTTTTGA GAACGTAAAA GGCATTTTAT GTGGTCATGT GCACCAAGAC ATGAATGTTC TTTATAATGG CATCCGCGTG ATGGCAACGC CGTCGACTTG TGTGCAATTT AAACCGGACT CCGATGATTT TGCACTTGAT ACAGAATCAC CAGGTTGGCG AGAACTTGAG TTGCACAGTA ATGGTGACAT TACCACAGAA GTCAACCGAC TACCCGATGG CCAATTCCAG CCAGACTTTA ATTCAAACGG ATACTAA
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Protein sequence | MRSSSDSIKL LQITDTHLFE ADEGSLLSVR TADSFAAVVQ EILNHQVQYE YILATGDISQ DHSAESYQRF AEGIAPLKKD CFWLPGNHDY KPNMGSVLPS PQIQAAEHVM LGEHWQLVLL DSQVVGVPHG RLSDQQLALL EEKLAENPQR HTLVLLHHHP LLVGSAWLDQ HALKDADAFW QVVDRFENVK GILCGHVHQD MNVLYNGIRV MATPSTCVQF KPDSDDFALD TESPGWRELE LHSNGDITTE VNRLPDGQFQ PDFNSNGY
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