Gene VIBHAR_00872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00872 
Symbol 
ID5554293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp863559 
End bp864365 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content46% 
IMG OID640906366 
Productcyclic 3',5'-adenosine monophosphate phosphodiesterase 
Protein accessionYP_001444099 
Protein GI156973192 
COG category[R] General function prediction only 
COG ID[COG1409] Predicted phosphohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGATCAT CTAGTGACAG CATAAAGCTA TTACAAATCA CGGATACTCA CCTGTTTGAG 
GCAGATGAGG GCAGTTTGCT GAGCGTAAGA ACCGCTGACA GCTTCGCAGC CGTGGTACAA
GAGATTCTTA ATCACCAAGT GCAGTATGAA TACATTTTGG CAACGGGTGA TATTTCACAA
GACCATAGTG CCGAGTCTTA CCAGCGTTTT GCTGAGGGTA TCGCGCCGCT GAAAAAAGAT
TGTTTCTGGC TTCCAGGCAA CCACGACTAC AAGCCAAATA TGGGCAGTGT ACTGCCATCT
CCTCAAATTC AAGCTGCTGA GCATGTGATG CTTGGTGAGC ATTGGCAGTT AGTCTTATTG
GATTCACAAG TGGTGGGTGT ACCCCACGGA CGTTTGAGTG ACCAACAGTT AGCACTGTTA
GAAGAAAAAC TGGCAGAAAA CCCGCAAAGA CATACCTTGG TGCTATTACA CCACCACCCA
TTGTTGGTAG GAAGTGCTTG GTTAGATCAG CATGCATTGA AAGATGCGGA TGCTTTCTGG
CAAGTGGTGG ACCGTTTTGA GAACGTAAAA GGCATTTTAT GTGGTCATGT GCACCAAGAC
ATGAATGTTC TTTATAATGG CATCCGCGTG ATGGCAACGC CGTCGACTTG TGTGCAATTT
AAACCGGACT CCGATGATTT TGCACTTGAT ACAGAATCAC CAGGTTGGCG AGAACTTGAG
TTGCACAGTA ATGGTGACAT TACCACAGAA GTCAACCGAC TACCCGATGG CCAATTCCAG
CCAGACTTTA ATTCAAACGG ATACTAA
 
Protein sequence
MRSSSDSIKL LQITDTHLFE ADEGSLLSVR TADSFAAVVQ EILNHQVQYE YILATGDISQ 
DHSAESYQRF AEGIAPLKKD CFWLPGNHDY KPNMGSVLPS PQIQAAEHVM LGEHWQLVLL
DSQVVGVPHG RLSDQQLALL EEKLAENPQR HTLVLLHHHP LLVGSAWLDQ HALKDADAFW
QVVDRFENVK GILCGHVHQD MNVLYNGIRV MATPSTCVQF KPDSDDFALD TESPGWRELE
LHSNGDITTE VNRLPDGQFQ PDFNSNGY