Gene VIBHAR_00870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00870 
Symbol 
ID5554208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp862404 
End bp863054 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content45% 
IMG OID640906364 
Producthypothetical protein 
Protein accessionYP_001444097 
Protein GI156973190 
COG category[L] Replication, recombination and repair 
COG ID[COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding 
TIGRFAM ID[TIGR00052] nudix-type nucleoside diphosphatase, YffH/AdpP family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACAGT GTGACAAGCA ACAGAACGAT CTTACTTCCC AAGATGTGGA AATAATCTCG 
AAAGAAACCG TGTTTAAAGG TTTCTTTAAA ATGGTGAAAT ACCGTTTTAA GCATAGGTTA
TTTGCTGGTG GTTGGAGTGG GATTGTCGAA CGAGAAATGT TCGAACGTGG TCATGCTGCC
GCCATGCTCC CGTATGATCC TGTGACTGAT CAGGTTGTGA TCATTGAACA AATCAGAGTA
GGAGCCTTGG AACATTCATA CCCATGGCAG TACGAAATTG TCGCTGGCAT GATTGATCGT
GACGAATCTG CTGAAGAGGT GATTCGTCGA GAAGCGGAAG AAGAAGCGGG TATTCAGGTC
GGACGTGTGG CTCCGATAAC CTCTTATTAC CCTTCTTCTG GCGGTTGCTC TGAAAAGCTG
GATGTATTCA TTGGCGAAGT GGATGCAACT AAAGCGCATG GCATTCATGG TTTAGACTAT
GAGAATGAAG ATATTCGAGT CCATGTCATG AGTCGTGAAA CCGCGTATCA GTGGGTGAAA
GATGGAAAAT TCGAAAACGG TGCCTCAATC ATTGCTCTTC AATGGTTGCA GTTAAATCAC
CAAGAATTGA CATCGCAATG GGAAGTTTCC CCGAAAGTGG AGAGTAAGTA A
 
Protein sequence
MQQCDKQQND LTSQDVEIIS KETVFKGFFK MVKYRFKHRL FAGGWSGIVE REMFERGHAA 
AMLPYDPVTD QVVIIEQIRV GALEHSYPWQ YEIVAGMIDR DESAEEVIRR EAEEEAGIQV
GRVAPITSYY PSSGGCSEKL DVFIGEVDAT KAHGIHGLDY ENEDIRVHVM SRETAYQWVK
DGKFENGASI IALQWLQLNH QELTSQWEVS PKVESK