Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00870 |
Symbol | |
ID | 5554208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 862404 |
End bp | 863054 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640906364 |
Product | hypothetical protein |
Protein accession | YP_001444097 |
Protein GI | 156973190 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding |
TIGRFAM ID | [TIGR00052] nudix-type nucleoside diphosphatase, YffH/AdpP family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACAGT GTGACAAGCA ACAGAACGAT CTTACTTCCC AAGATGTGGA AATAATCTCG AAAGAAACCG TGTTTAAAGG TTTCTTTAAA ATGGTGAAAT ACCGTTTTAA GCATAGGTTA TTTGCTGGTG GTTGGAGTGG GATTGTCGAA CGAGAAATGT TCGAACGTGG TCATGCTGCC GCCATGCTCC CGTATGATCC TGTGACTGAT CAGGTTGTGA TCATTGAACA AATCAGAGTA GGAGCCTTGG AACATTCATA CCCATGGCAG TACGAAATTG TCGCTGGCAT GATTGATCGT GACGAATCTG CTGAAGAGGT GATTCGTCGA GAAGCGGAAG AAGAAGCGGG TATTCAGGTC GGACGTGTGG CTCCGATAAC CTCTTATTAC CCTTCTTCTG GCGGTTGCTC TGAAAAGCTG GATGTATTCA TTGGCGAAGT GGATGCAACT AAAGCGCATG GCATTCATGG TTTAGACTAT GAGAATGAAG ATATTCGAGT CCATGTCATG AGTCGTGAAA CCGCGTATCA GTGGGTGAAA GATGGAAAAT TCGAAAACGG TGCCTCAATC ATTGCTCTTC AATGGTTGCA GTTAAATCAC CAAGAATTGA CATCGCAATG GGAAGTTTCC CCGAAAGTGG AGAGTAAGTA A
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Protein sequence | MQQCDKQQND LTSQDVEIIS KETVFKGFFK MVKYRFKHRL FAGGWSGIVE REMFERGHAA AMLPYDPVTD QVVIIEQIRV GALEHSYPWQ YEIVAGMIDR DESAEEVIRR EAEEEAGIQV GRVAPITSYY PSSGGCSEKL DVFIGEVDAT KAHGIHGLDY ENEDIRVHVM SRETAYQWVK DGKFENGASI IALQWLQLNH QELTSQWEVS PKVESK
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