Gene VIBHAR_00860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00860 
Symbol 
ID5556299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp848357 
End bp849079 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content47% 
IMG OID640906354 
ProductType II secretory pathway, component ExeA 
Protein accessionYP_001444087 
Protein GI156973180 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGTCA TGAAGCATGT TGGACTCTTC CTGTTACCAA TCAGTGTTAC TGCGGTTGGG 
GCAGCTTGGT ACTTGGATCT GTTTGCTCAA GAGGCTCCTG AACCTGTGGT CGTAGAGAAA 
GCACAAGCGT TAGCGAAGCC AGTAATGCCA ATGGTGAAAG CAAAATTTGA AAGTTTGAGT 
TATCCAGACG AACCACAATT GGCGCAGTTG GAACGAGATT GGCCTACCGC GGAGCTATCG 
CAAGATTACG GTACTTTTGT CGATCAAAAC TATGCGGCTA ACAACGCAAT TCCTGGGGAG 
CAGGATCTTT TAGAACCTTC ACAACAAACG GTTAAAACCA GCCCGAGCAT GCAGAGCCAT 
GATGACCTTG GTTTATCGCT CGATGATCTC GATTTGTCCT CATTGTCGCC AGATTTGGCG 
CTGAAAGTTG AAAGTGCTTT ATCAAACAAT GATCAACCGT CACTGAATAG CTCTTCATCT 
GTTGGTGATC TGGAGCGTGA AGCTCGCCAG TGGCATGGTC GCTTGCCAGC TCTGAACTTA 
CAGACTCACA TGTATTCAAG TGATGCAAAC CGTCGTTGGG TGAAGATCAA CAACGTCGAG 
TACCATCAAG GTGATGTGGT TGATGGACAA GTCACGCTAA AAGAGATCCA ACCGCAAGCA 
GTGATCGTCG AATTCCAAGG GGAACAAATC CGCATACCTG CGCTGTATGA ATGGAAAGGG 
TAA
 
Protein sequence
MSVMKHVGLF LLPISVTAVG AAWYLDLFAQ EAPEPVVVEK AQALAKPVMP MVKAKFESLS 
YPDEPQLAQL ERDWPTAELS QDYGTFVDQN YAANNAIPGE QDLLEPSQQT VKTSPSMQSH 
DDLGLSLDDL DLSSLSPDLA LKVESALSNN DQPSLNSSSS VGDLEREARQ WHGRLPALNL 
QTHMYSSDAN RRWVKINNVE YHQGDVVDGQ VTLKEIQPQA VIVEFQGEQI RIPALYEWKG