Gene VIBHAR_00830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00830 
Symbol 
ID5554394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp818698 
End bp819459 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content46% 
IMG OID640906324 
Producttranscriptional regulator 
Protein accessionYP_001444058 
Protein GI156973151 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1349] Transcriptional regulators of sugar metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAAAC GAAACACTCA ACTAAGAAGA CACGCCATTT CTAACCTAGT AAGTGAGCTT 
GGGGAAGTTA GCGTTGATGA GCTAGCACAG AAATTTGAAA CCTCAGAGGT CACGATTAGA
AAGGACTTAG CTTCTTTGGA GAAAAACGGA CAACTTTTGC GCCGTTATGG TGGCGCAATC
TCTATTCCAA CGGAAGTTAT CCATGAAGAA TTGAGTCCAA TTGTTTCGAG TCGAAAGTTA
AGTCTAGCAA AAGCAGCCGC ATCACTGATT CGAGAGCATA ACCGAATTGT GATCGACAGT
GGCAGCACGA CTGCGGCGCT GATTCAGCAA TTAAACGACA AACGAGGCTT GGTTGTTATG
ACCAACTCGT TGCATGTTGC GAACGCACTT AACGAATTAG AGAGCGAACC AACCCTGTTA
ATGACAGGCG GCACTTGGGA TACGCACTCA GAATCCTTCC AAGGCAAAGT AGCCGAATCT
GTATTGAGAG CTTACGACTT TGACCAGCTA TTTATCGGTG CTGACGGTAT CGATCTAGAG
CGCGGAACCA CAACGTTTAA TGAATTGGTT GGCTTAAGTA AAGTCATGGC GGAGGTGTCT
CGTGAAGTCA TCGTCATGAT CGAGTCTGAG AAAGTGGGGC GTAAGATCCC GAACTTAGAA
CTTGCTTGGG ACCAAATTGA TGTGTTGGTT ACCGATGCAG AGTTGCAGCC AGAACACAGA
GCAAAGATTG AACAACATAG CGTAAAAGTC ATTTGCGCCT AA
 
Protein sequence
MSKRNTQLRR HAISNLVSEL GEVSVDELAQ KFETSEVTIR KDLASLEKNG QLLRRYGGAI 
SIPTEVIHEE LSPIVSSRKL SLAKAAASLI REHNRIVIDS GSTTAALIQQ LNDKRGLVVM
TNSLHVANAL NELESEPTLL MTGGTWDTHS ESFQGKVAES VLRAYDFDQL FIGADGIDLE
RGTTTFNELV GLSKVMAEVS REVIVMIESE KVGRKIPNLE LAWDQIDVLV TDAELQPEHR
AKIEQHSVKV ICA