| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_00792 |
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| Symbol | |
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| ID | 5555875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | - |
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| Start bp | 774551 |
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| End bp | 777334 |
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| Gene Length | 2784 bp |
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| Protein Length | 927 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640906286 |
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| Product | hypothetical protein |
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| Protein accession | YP_001444020 |
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| Protein GI | 156973113 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATCTG CCGATTTCTT TCAGAAGTCG CGCTCACACC TAAAAAAAGA AACCGCACAT
TTCCTTTGCC CACAAATCAA TGGGTTACAG ATTTGTAGCG ATTCACTCGA AAGCAAACTT
CGCTCTATTC ACTACACTGT TATAGCGAAG CGGGGTTCTC GATACACAAT ACAGACAGGA
CCATCAATAA TAAGGAAAAA GTACATGGCG ACGAACAACA CTCCGTCACA AGATGTGCAA
GAAATGGTGG CTCAGGCAGA CACAGGTGCG CGTAGCCCAA TGGGCTTGCA AGGTAGAATC
TTATGGTTCG TACCACTGTG CTGGTCGCTA TTTCAATTAT GGTATGCCTC TCCGCTACCA
TTTATTTTTA ATTTTGGCGT ACTCAACGAT ACTGAAGCGC GAGCAATTCA TTTAACTTTT
GCCACTTTCC TCGCTTTCAC TGCTTATCCA GCAATGAAGA ACTCTCCGCG TGACCATATC
CCATTAATCG ACTGGGCATT GGCATTAGCG GGGAGCTTTG CTGCAGCTTA TATTTATATT
TTCTATACCG AACTGGCCGG GCGCTCTGGT GCACCGACAA CCGTTGATAT CGTAGTCTCA
GTAACGGGAA TGGCTCTATT GCTTGAAGCA ACGCGTCGTG CACTGGGTCC ACCGTTGATG
GTCGTTGCCG CAGTATTTCT GACCTACACC TTTGCCGGTC CATATATGCC AGATGTTATT
GCTCATAAAG GTGCAAGCTT AAACAAAGCA ATGTCACACT TATGGCTAAC CACAGAGGGT
GTATTTGGTG TTGCACTTGG CGTATCGACT TCGTTTGTAT TCTTGTTCGT ACTTTTCGGT
GCAATGCTAG AACGCGCGGG CGCAGGTGCT TACTTCATTA AAGTAGCCTT CTCACTGCTT
GGTCACATGA AGGGCGGTCC TGCAAAAGCG GCTGTCGTTG CATCCGGCCT ATCTGGTCTG
GTTTCGGGCT CATCCATCGC AAACGTAGTA ACCACAGGTA CATTTACGAT TCCGCTGATG
AAGCGAGTAG GCTTCCCGGG AACAAAGGCA GGTGCGGTTG AAGTTGCTGC GTCGACGAAT
GGCCAGCTAA CGCCGCCTAT CATGGGCGCT GCGGCCTTCC TAATGGTTGA ATATGTTGGT
ATCTCTTACG TTGAGGTAAT CAAAGCAGCC CTACTTCCTG CACTTATTTC CTACATCGCT
CTGATTTACA TCGTTCACCT TGAAGCATGT AAAGCAGGCA TGACCGGCCT TCCTCGTCGC
CACAACCCAA CCATGCTACA AAGCCTATTG TCATTTACTG GCACTATCCT TGGCTTGTGC
GTCATCAGCG CCTTGGTTTA CTACGGTGTG GGTTGGACTA AAGACGTATT TGGCGATGCT
GCAACAACCA TCGTAACCAT CGCCCTACTA ATTGCTTACG TCGGTCTGGT GAAGATTTCA
GCGAATCACG TGAAAGACGG CGCAATTGAA ATTGATGCAG AACTCACAGA GGTTCCAGAT
CCAGGCCCAA CGATTAAATC TGGTCTGCAC TATCTGCTAC CAATCGTTGT GCTGGTTTGG
TGTTTGACTG TAGAACGCTT CTCACCGGGT CTGTCAGCAT TCTGGGCAAC CGTGTTCATG
ATCTTTATCT TGCTAACGCA GCGCCCACTG ATTGCTTTGC TATCAAAACA AGGTGACTTG
GTTGAGCAGA CCAAAGACGG TTTTGTTGAT CTCGCAGAGA GTTTGGTATC TGGTGCGCGC
AACATGATCG GTATCGGCGT GGCAACCGCT GCAGCAGGTA CGGTAGTTGG TGTGGTCACC
TTGACTGGTA TCGGCTTGGT TATGACAGAC TTCGTCGAGT TCATCTCTGG CGGTAGCATC
ATCCTTATGT TGCTGTTTAC GGCAGTAATC AGCTTGATCC TGGGTATGGG TCTGCCAACG
ACGGCAAACT ATATCGTGGT ATCAACGCTA ATGGCACCGG TTATCGTAAC TCTGGGTGCG
GCTCATGGCC TGATCATCCC ACTGATTGCG GTGCACTTAT TTGTGTTCTA TTTCGGTATC
CTTGCAGATG ATACGCCTCC TGTAGGTTTA GCTGCCTTTG CCGCTGCCGC AATTGCTAAG
TCAGATCCAA TTCGTACGGG TATTCAAGGC TTTACCTACG ATATTCGAAC CGCAATTCTG
CCATTCATGT TCGTCTTCAA CACTCAACTC TTATTGATGG GCATTGATTC ATGGTGGCAT
CTAGCGTTAA CCGTGATCTC TTCCATTATT GCGATGTTGA TCTTCTCCGC GGCAACACAA
GGTTGGTGGT TCACTCGTAA CAAGTGGTGG GAAACGATCC TACTATTAGT ATTAACCTTC
TCGTTCTTCC GCCCTGGTTT TTGGTGGGAC ATGCTCTACC CAGCGAAAGT TCTTTCCCCT
GGTGTTGAGA TAGCTCAAAT CACAGAAGGG TTAAATGTAG GAGAATCCAT AGAGTTACGT
GTCGCTGGAG AAAACCTTGA AGGTGACTAC GTTGAAAAAA CGGTACGTCT TCCGTTCGAA
GATAAAGCGG TAACCGCTGA AGAACGACTT TCTTCAATGG GCCTAATGCT GACCGAGAAC
GACGGTAAAA TGATCGTAGA CATGGTTGAA TTTGGCAGCC CGGCAGAATC TTCAGGAATC
GACTTCGATT GGGAGATCAA ATGGGTAGTT CAAGATGCTG AACGACCAAT GAAAGAATGG
GTATTTGTGC CTTGTTTGAT GATTTTGCTG GTACTTGCCC TGAACCAAAA ACGTCGTGCT
CGTAAGGAAC AGCTGAGCGC ATAA
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| Protein sequence | MQSADFFQKS RSHLKKETAH FLCPQINGLQ ICSDSLESKL RSIHYTVIAK RGSRYTIQTG
PSIIRKKYMA TNNTPSQDVQ EMVAQADTGA RSPMGLQGRI LWFVPLCWSL FQLWYASPLP
FIFNFGVLND TEARAIHLTF ATFLAFTAYP AMKNSPRDHI PLIDWALALA GSFAAAYIYI
FYTELAGRSG APTTVDIVVS VTGMALLLEA TRRALGPPLM VVAAVFLTYT FAGPYMPDVI
AHKGASLNKA MSHLWLTTEG VFGVALGVST SFVFLFVLFG AMLERAGAGA YFIKVAFSLL
GHMKGGPAKA AVVASGLSGL VSGSSIANVV TTGTFTIPLM KRVGFPGTKA GAVEVAASTN
GQLTPPIMGA AAFLMVEYVG ISYVEVIKAA LLPALISYIA LIYIVHLEAC KAGMTGLPRR
HNPTMLQSLL SFTGTILGLC VISALVYYGV GWTKDVFGDA ATTIVTIALL IAYVGLVKIS
ANHVKDGAIE IDAELTEVPD PGPTIKSGLH YLLPIVVLVW CLTVERFSPG LSAFWATVFM
IFILLTQRPL IALLSKQGDL VEQTKDGFVD LAESLVSGAR NMIGIGVATA AAGTVVGVVT
LTGIGLVMTD FVEFISGGSI ILMLLFTAVI SLILGMGLPT TANYIVVSTL MAPVIVTLGA
AHGLIIPLIA VHLFVFYFGI LADDTPPVGL AAFAAAAIAK SDPIRTGIQG FTYDIRTAIL
PFMFVFNTQL LLMGIDSWWH LALTVISSII AMLIFSAATQ GWWFTRNKWW ETILLLVLTF
SFFRPGFWWD MLYPAKVLSP GVEIAQITEG LNVGESIELR VAGENLEGDY VEKTVRLPFE
DKAVTAEERL SSMGLMLTEN DGKMIVDMVE FGSPAESSGI DFDWEIKWVV QDAERPMKEW
VFVPCLMILL VLALNQKRRA RKEQLSA
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