Gene VIBHAR_00788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00788 
SymboltbpA 
ID5555821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp770695 
End bp771687 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content49% 
IMG OID640906282 
Productthiamine transporter substrate binding subunit 
Protein accessionYP_001444016 
Protein GI156973109 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4143] ABC-type thiamine transport system, periplasmic component 
TIGRFAM ID[TIGR01254] ABC transporter periplasmic binding protein, thiB subfamily
[TIGR01276] thiamine ABC transporter, periplasmic binding protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAACCA CTCTTAGTCT GATTGCCCTT ACAGCCATCA CTTCTACTTC GGCGTTTGCC 
GCTGAAAACA CCCTAACTGT CTATACGTAT GACTCTTTCG CTGCCGATTG GGGACCAGGT 
CCTAAGGTCG AAAAAGCGTT CGAAGCCAAA TGCGGGTGCG ATGTTAACTT CGTTGCGCTG 
GACGACGGCG TTTCTATTCT TAACCGCCTT CGCTTGGAAG GAAGCAACAG CAAAGCGGAT 
ATCGTGTTAG GTTTGGATAA TAACCTGATG GCGGAAGCGA AAAAGACTGG GCTTCTGGCT 
GAGCACAACG TTGATACATC GAGGACGACC TTGCCTAACG GTTGGGATGA TAAGACCTTC 
GTACCGTACG ATTACGGCTA CTTCGCGTTT GTATACAACA AGGAGAAGTT GGCGAACCCT 
CCAAAAAGCA TGAAAGAGCT GGTGGAAGAG CGTGATGATC TGAAAGTGAT TTACCAAGAC 
CCTCGAACTT CGACGCCGGG TCAAGGCTTG ATGTTGTGGA TGAAGTCCAT CTACGGCGAT 
GATGCGACTC AAGCATGGAA GCAACTGGCA ACGAAAACAG TTACGGTTAC CAAAGGTTGG 
TCAGAAGCTT ACTCGATGTT CTTGAACGGT GAGTCCGACC TCGTGCTGTC TTACACGACT 
TCTCCAGCGT ACCATTTGAT TGCAGAAGGT GATGCGAAAT ACGCCAGCGC AGATTTTGCC 
GAAGGGCACT ACATGCAAGT GGAAGTGGCG GCTAAGGTGA AAGGTTCAAA GAATGCTGAG 
CTTGCGGATG AGTTCATGAA CTTTATTTTG AGTGATGATT TCCAATCTGC GATGCCAACA 
GGTAACTGGA TGTACCCAGT GACTGACGTT GAATTACCAA AAGGCTTTGA AACGCTGAGC 
GTGCCAAGCA AGCCATTAAG CTTCAGCGCA GACGAAGTCG CGAAAATGCG CAAGACTTGG 
ATTCGCGAGT GGCAAAGCGC ATTGACGTTC TAA
 
Protein sequence
MKTTLSLIAL TAITSTSAFA AENTLTVYTY DSFAADWGPG PKVEKAFEAK CGCDVNFVAL 
DDGVSILNRL RLEGSNSKAD IVLGLDNNLM AEAKKTGLLA EHNVDTSRTT LPNGWDDKTF 
VPYDYGYFAF VYNKEKLANP PKSMKELVEE RDDLKVIYQD PRTSTPGQGL MLWMKSIYGD 
DATQAWKQLA TKTVTVTKGW SEAYSMFLNG ESDLVLSYTT SPAYHLIAEG DAKYASADFA 
EGHYMQVEVA AKVKGSKNAE LADEFMNFIL SDDFQSAMPT GNWMYPVTDV ELPKGFETLS 
VPSKPLSFSA DEVAKMRKTW IREWQSALTF