| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_00787 |
|---|
| Symbol | |
|---|
| ID | 5555824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | + |
|---|
| Start bp | 769806 |
|---|
| End bp | 770444 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640906281 |
|---|
| Product | aromatic acid decarboxylase |
|---|
| Protein accession | YP_001444015 |
|---|
| Protein GI | 156973108 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase |
|---|
| TIGRFAM ID | [TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATCTA TGCAGCAAAA AGTAACCCCT AAAAAAGCCA TCACACTCGC ATTAACGGGC
GCCTCTGGTG CCCCGTATGG ACTTCGTCTT CTTGAATGTT TAGTGGCAGC GGATTACCAC
GTCTACGTGT TGATCTCTTC GGCTGCGCGC GTGGTAATGG CGACCGAACA TGACCTGAAA
CTGCCAAGTG GCCCTGAAGC GGCGCAAAAA GCGCTGGTTG AGCACCTTAA TTGCAATCCA
GATAACATCA CCGTTTGTGG CAAAGATGAT TGGTTCTCGC CTGTGGCCTC TGGCTCTGCG
GCGCCTAAGC AAATGGTGGT GTGTCCATGT TCTGCAGGGA GTGTTGCGGC CATTGCACAT
GGCATGTCGG ATAACTTGAT TGAGCGCGCT GCTGATGTAG TAATGAAAGA ACGCGGACAG
TTACTGCTTG TGGTGCGTGA AACGCCTTTC TCAACACTGC ACCTTGAAAA TATGCACAAG
CTTTCGCAAA TGGGTGTCAC CATTATGCCG GCAGCGCCGG GCTTCTATCA TCAACCTAAA
ACTATCGAAG ACTTAGTAGA TTTTATGGTG GCGAGAATTC TTGATCACCT TGGCATTGAG
CAAGGTTTAG TGCCACGTTG GGGTTATGAC CAACGTTGA
|
|---|
| Protein sequence | MTSMQQKVTP KKAITLALTG ASGAPYGLRL LECLVAADYH VYVLISSAAR VVMATEHDLK
LPSGPEAAQK ALVEHLNCNP DNITVCGKDD WFSPVASGSA APKQMVVCPC SAGSVAAIAH
GMSDNLIERA ADVVMKERGQ LLLVVRETPF STLHLENMHK LSQMGVTIMP AAPGFYHQPK
TIEDLVDFMV ARILDHLGIE QGLVPRWGYD QR
|
|---|
| |