Gene VIBHAR_00779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00779 
Symbol 
ID5555737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp758493 
End bp760205 
Gene Length1713 bp 
Protein Length570 aa 
Translation table11 
GC content48% 
IMG OID640906273 
Producthypothetical protein 
Protein accessionYP_001444007 
Protein GI156973100 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0729] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAGAA AAGCTACCCC GATCATTGTC AGTCTACTTG CCTTTTCTCA TAGCGCTTAC 
GCCGATGTTT CCTTAAAGAT AAAGGGCATT GATGGCGCGC TAGAAGATAA TGTGAACGCT
TACTTGTCTT CAATTCCAGA AGACGATTAC TCGACGTCGT TGCGCTTTCA GGCGCGATTG
GAACAAAGTA TCACTGAAGC GCTCAATGCG CTTGGCTATT ATCATGCGAA AATTTCATAC
ACTATTACGA AAGATAATGA TGAATTGATC GTCAACGTCA AACCGGGCGA ACCTGTCAGA
ATCAAAGAAA TTGACGTGGT GATTTCAGGT GAGGCGGGGG AAGATGAAGA ATTCGCGAAC
CTGATCAAAA AATCACGCTT GAAAGAAGGT CGAGTCTTAA ACCAAGGGGA ATACGACGCT
CTAAAATCAG GTATTCGTAA CTTAGCGTTG CAACGTGGCT ACTTTAACGG TGACTTTAAA
TTGAGCCGTT TAGAGGTGGT GCCCGAACTT AATGAAGCTA ACGTTCGTCT GCACTATGAC
AGTGGTATCC GTTATCACTT TGGTACGGTT GAAATTTTAG GTAGTCAGAT CTGGGAAGAT
CGCGTTGATT CTTTGCGCCC ATTTAAAACC GGTGAGCCTT ACTTGGTCTC TGAAGTGGGT
GAATATAACC AGAACCTTTC GAATACGGAT TGGTTCTCAT CGGTGTTTGT TGAGCCTGAT
CTCACCAAGT TAGATGATGG TCGAGACCTG CCAATCAAAG TCTCACTTGC TCCTGCTGCG
AAAAACCAAA TTGAAACGGG TATTGGTTAC TCTACCGATA CTGGTGTGCG CGGTACGCTG
AAATGGAAAA AACCATGGGT GAGTGCGCGA GGCCACAGCT TTGATACCGC GCTTTCTCTG
TCTAAACCAG AGCAGACCAT CACGGCTGGC TACAAGATCC CACTTGATGA CGTATTGCAC
GAATACTACC AACTTCAGTT CGGTTTGAAG CATCTCGATA ACCGCGATAC GGAGAGTTTG
GAATCGAATC TTGCGGTAGA ACGCCACTGG ATTACCGATG GTGGTTGGCA CAAAACGTTG
TATGTTCGTC ACTTGTACGA AAACTTCTCG CAAGGTTTGC AAGAAGATGG TGTGCAGTTT
GTTTTACCTG GTGCCTCGTT TTCTCGCACA CGGACTCGTG GCGGTAACAT GCCAATGTGG
GGCGATAAAC AGAGTGTGAC GGTTGAATAC GGTGACCCGG CGTTGTTGTC TGAAACTCGC
GTACTTCGTT TGTTAGGTCG CACATCTTGG ATTCGTGGTA TCGGACAAAA CCACCGTGGT
TTATTCCGCC TTGAAGGCGG CGCCAACGTC ACTGATGAAT TTGAAAAACT CTCGCCATCG
CTGCGTTTCT TCGCTGGTGG TGACAACAAC ATTCGTGGTT ACGGCTACGA ATCGATCTCG
CCAACAGACT CGAGTGGCGC ATTGACCGGT GCGAAATACA TGGTAACCAG TACGTTAGAG
TACCAGTATC GTGTGCATGG CAACTGGTGG GGGGCGGTAT TCTACGACAT TGGTGACGCA
TTTAATAAAA CCCCTGAATG GAAATCGGGT GCGGGTGTCG GTATCCGCTG GGCATCACCG
GTCGGTCCGG TGAGCTTTGA CTTTGCTTGG GGCCTAGACG CCGAGCCAGA TCCAGAATTC
CGTATCCACT TCTCTTTGGG GCCAGAGCTA TGA
 
Protein sequence
MIRKATPIIV SLLAFSHSAY ADVSLKIKGI DGALEDNVNA YLSSIPEDDY STSLRFQARL 
EQSITEALNA LGYYHAKISY TITKDNDELI VNVKPGEPVR IKEIDVVISG EAGEDEEFAN
LIKKSRLKEG RVLNQGEYDA LKSGIRNLAL QRGYFNGDFK LSRLEVVPEL NEANVRLHYD
SGIRYHFGTV EILGSQIWED RVDSLRPFKT GEPYLVSEVG EYNQNLSNTD WFSSVFVEPD
LTKLDDGRDL PIKVSLAPAA KNQIETGIGY STDTGVRGTL KWKKPWVSAR GHSFDTALSL
SKPEQTITAG YKIPLDDVLH EYYQLQFGLK HLDNRDTESL ESNLAVERHW ITDGGWHKTL
YVRHLYENFS QGLQEDGVQF VLPGASFSRT RTRGGNMPMW GDKQSVTVEY GDPALLSETR
VLRLLGRTSW IRGIGQNHRG LFRLEGGANV TDEFEKLSPS LRFFAGGDNN IRGYGYESIS
PTDSSGALTG AKYMVTSTLE YQYRVHGNWW GAVFYDIGDA FNKTPEWKSG AGVGIRWASP
VGPVSFDFAW GLDAEPDPEF RIHFSLGPEL