Gene VIBHAR_00747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00747 
SymbolrpsE 
ID5555439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand+ 
Start bp730044 
End bp730547 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content47% 
IMG OID640906241 
Product30S ribosomal protein S5 
Protein accessionYP_001443975 
Protein GI156973068 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0098] Ribosomal protein S5 
TIGRFAM ID[TIGR01021] ribosomal protein S5, bacterial/organelle type 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAAG AACAACAAGT TCAAGCGAAT GATTTGCAAG AAAAGCTAAT CGCAGTTAAC 
CGCGTTTCTA AAACGGTTAA AGGCGGTCGA ATCATGAGCT TCACTGCACT AACAGTAGTT 
GGTGACGGTA ACGGTCGTGT AGGTTTCGGT TACGGCAAAG CTCGTGAAGT ACCTGCAGCG 
ATTCAAAAAG CAATGGAAAA AGCGCGTCGT AACATGACTA CTATCGCGCT AAACGAAGGC 
ACTCTTCACC ACCCAGTGAA AGGTCGCCAC TCGGGCTCTA AAGTTTACAT GCAGCCTGCT 
GCAGAAGGTA CTGGTGTTAT CGCAGGTGGT GCGATGCGTG CAGTACTAGA AGTTGCTGGC 
GTACACAACG TACTATCTAA AGCATACGGT TCTACGAACC CTATCAACAT CGTTCGTGCA 
ACGATCGATG CACTAGGTAG CATGAAGTCG CCAGAAATGG TTGCTGCTAA ACGTGGTCTA 
ACTGTTGAAG CTATTTCGGA GTAA
 
Protein sequence
MAKEQQVQAN DLQEKLIAVN RVSKTVKGGR IMSFTALTVV GDGNGRVGFG YGKAREVPAA 
IQKAMEKARR NMTTIALNEG TLHHPVKGRH SGSKVYMQPA AEGTGVIAGG AMRAVLEVAG 
VHNVLSKAYG STNPINIVRA TIDALGSMKS PEMVAAKRGL TVEAISE