Gene VIBHAR_00742 details

Gene Information

• Locus tag: VIBHAR_00742
• Symbol: rplE
• ID: 5555349
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: +
• Start bp: 727836
• End bp: 728375
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640906236
• Product: 50S ribosomal protein L5
• Protein accession: YP_001443970
• Protein GI: 156973063
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0094] Ribosomal protein L5

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGAAAC TGCATGATTA CTACAAGTCG TCTGTAGTCG CTGAACTGAC CAAACAGTTT 
AGCTACACAA GCGTCATGCA AGTCCCTAGA ATCGAGAAAA TCACCCTAAA CATGGGTGTT 
GGTGAAGCAA TCAACGATAA GAAACTGCTA GAAAACGCAG CTGCTGATAT GGCAACGATC 
TCTGGTCAAA AGCCACTTAT CACTAAAGCT CGTAAATCTG TTGCAGGTTT CAAAATCCGT 
GAAGGCTACC CTATCGGTTG TAAAGTAACC TTGCGTGGCG AACGTATGTG GGAATTTTTA 
GAGCGTTTAA TCTCTATCGC ACTTCCACGT GTACGTGACT TCCGTGGTGT TAGCGCTAAG 
TCTTTTGACG GTCGCGGTAA CTACAGCATG GGCGTTCGCG AGCAAATCAT CTTCCCGGAA 
ATCGACTTTG ATAAAGTTGA TCGAGTACGC GGTCTAGACA TCACTATTAC GACGTCTGCT 
GGTACTGATG AGGAAGGCCG TGCTCTGCTG GCTGCCTTTA ACTTCCCATT CCGTAAGTAA 

 

Protein sequence

MAKLHDYYKS SVVAELTKQF SYTSVMQVPR IEKITLNMGV GEAINDKKLL ENAAADMATI 
SGQKPLITKA RKSVAGFKIR EGYPIGCKVT LRGERMWEFL ERLISIALPR VRDFRGVSAK 
SFDGRGNYSM GVREQIIFPE IDFDKVDRVR GLDITITTSA GTDEEGRALL AAFNFPFRK