| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_00727 |
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| Symbol | |
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| ID | 5555181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009783 |
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| Strand | - |
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| Start bp | 718815 |
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| End bp | 721016 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640906221 |
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| Product | primosome assembly protein PriA |
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| Protein accession | YP_001443955 |
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| Protein GI | 156973048 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCCAT CCATCGCCCG AGTAGCACTG CCAGTCCCGC TCGACAAACA GTTTGACTAT
GTCATACCTA GTCACCTTTT CCCTGTGATT GGCGGACGCG TTTCTGTGCC TTTTGGTCGG
CAGACTTTGG TTGGCATCGT GACCGCCATG GTAAATCATT CAGACTTTCC TAAAGAGCAA
CTGAAAGCGA TTAAAGCGGT ATTAGATGCC CAACCAGTTT GGCCAGAAAA ACTCTATTCT
TTACTGACTT GGTGCAGCCA GTTTTATCAG TATCCACTTG GTGACACACT TCATAATGCA
ATGCCTGCTG CCCTGCGTAA GGGAAAACCT GCCGATTTCG CGACATTACA AGAGTGGCAA
ATCACTGCGT CGGGTAAAGA TAAGCTGATG CAAGGCTTAG GGCGTGCAGT CAAGCAACAG
CGTGCTTTGC AGATGCTGGT CAATGGTTCA GTGCCACACC AAGAGTTCAT CGACCAAGAT
ATTGGCTCTA CCGTACTTAA GTCTTTGGAA GAGAAAGGCT GGGTCGAACT CATAGAGAAA
AAACCGACGA TCACTAAGTG GGGTCAACAA GTTGAGTTTG ATGTTGAAAA ACCAAAGCTC
AACCACGAAC AAGCTCTGGC GATTGCTAGC GTAAACAGCC AAACCGGCTT TGCCTGCTAT
TTATTAGAGG GCGTTACAGG TTCCGGCAAA ACCGAAGTTT ACCTTAACCT CATTAAGCCA
GTACTTGAAC AAGGTAAGCA AGCTTTGGTG CTCGTCCCTG AGATAGGCCT GACGCCCCAA
ACTATTAACC GCTTCAAGCG TCGCTTTAAT GTGCCTGTGG ATGTCATTCA CTCTGGGTTA
AATGATACCG AGCGACTCAA CGCTTGGCTT TCTGCGCGAG ACAAAGCCGC TGGCATCATT
ATTGGTACGC GCTCTGCCCT ACTAACGCCT TTTGCTGATC TTGGCATTAT CATTGTCGAT
GAAGAACACG ACTCGTCTTA TAAACAACAA GATAGCCTGC GCTACCATGC TCGTGATGTT
GCGGTGATGC GTGCACATAA AGAGCAAGTG CCTATTGTCC TCGGCTCTGC CACACCAGCC
TTAGAAACAC TGCACAATGC ACTAACGGGC AAGTACCACC ATTTAACTCT GACGCAACGC
GCCGGTTCTG CCGTTCCGAC CACTAACAAG GTACTTGATG TTAAAGGCCT CTATCTAGAC
AGTGGCTTAT CTGCGCCATT GATTGCTGAA ATGCGCAAAC ATCTAAAAGC GGGCAACCAA
GTGATGCTGT TCTTAAACCG TCGCGGCTTC TCACCAGCGT TAATGTGCCA TGAATGCGGC
TGGATTGCGG AATGTAAACG CTGTGATGCT TACTACACCT TCCACCAGTA CAGCAATGAG
ATTCGCTGTC ACCATTGTGG CTCACAGCAG CCTGTGATTA ATCAGTGCCA AGGTTGTGGT
TCGACTCAGT TGGTCACGGT GGGTGTGGGT ACCGAACAGC TTGAGTTGCA ACTGGCTGAG
CTCTTCCCAG AATACAAAGC CATTCGCATT GATAGAGACA GCACGCGCCG TAAAGGCAGT
TTAGAAGATG CGCTCGAATC GATTCGTAAA GGCGAATACC AAATTCTGAT TGGCACGCAG
ATGTTAGCAA AAGGCCACCA CTTCCCAAAT GTGACGCTTG TTGCGCTACT CGATGTTGAT
GGCTCCCTCT ACAGTAGTGA CTTCCGCGCC TCCGAGAGAC TGGCTCAACT GTTTATTCAG
GTAGCAGGCC GCGCAGGCCG CGCAAGCAAA CCCGGTGAAG TGATATTGCA AACTCACCAC
CCAGAACACA GTTTACTGCA GGCTCTACTA CAGAAAGACT ATCGCCACTT TGCTATGACC
GCATTGGAAG AGCGTAAACT CGCCCAACTG CCACCGTATA GCTTCTTGAC CTTATTTAAA
GCAGAAGCGA ACCAAAGCGA AGTGGTCGAA GACTTTTTAC GTCAGGTGCG TTTTACCCTT
GAATCACACC CATTGTTCGA TGATAGCTGT ATGGTATTGG GACCGACACC TTCACCACTG
GCTAAGCGCG CTGGCAAATA TCGATGGCAG CTTTTACTGC AAACTCAGCA TCGCTCATTG
ATGCAAAAGT TATTAACCAG TGCGAAACCT GCTATTGAGT TGTTGCCAAA TGCCAAGAAA
GTTCGCTGGA ATTTAGACAT AGAGCCACAG GATCTCAGCT AG
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| Protein sequence | MRPSIARVAL PVPLDKQFDY VIPSHLFPVI GGRVSVPFGR QTLVGIVTAM VNHSDFPKEQ
LKAIKAVLDA QPVWPEKLYS LLTWCSQFYQ YPLGDTLHNA MPAALRKGKP ADFATLQEWQ
ITASGKDKLM QGLGRAVKQQ RALQMLVNGS VPHQEFIDQD IGSTVLKSLE EKGWVELIEK
KPTITKWGQQ VEFDVEKPKL NHEQALAIAS VNSQTGFACY LLEGVTGSGK TEVYLNLIKP
VLEQGKQALV LVPEIGLTPQ TINRFKRRFN VPVDVIHSGL NDTERLNAWL SARDKAAGII
IGTRSALLTP FADLGIIIVD EEHDSSYKQQ DSLRYHARDV AVMRAHKEQV PIVLGSATPA
LETLHNALTG KYHHLTLTQR AGSAVPTTNK VLDVKGLYLD SGLSAPLIAE MRKHLKAGNQ
VMLFLNRRGF SPALMCHECG WIAECKRCDA YYTFHQYSNE IRCHHCGSQQ PVINQCQGCG
STQLVTVGVG TEQLELQLAE LFPEYKAIRI DRDSTRRKGS LEDALESIRK GEYQILIGTQ
MLAKGHHFPN VTLVALLDVD GSLYSSDFRA SERLAQLFIQ VAGRAGRASK PGEVILQTHH
PEHSLLQALL QKDYRHFAMT ALEERKLAQL PPYSFLTLFK AEANQSEVVE DFLRQVRFTL
ESHPLFDDSC MVLGPTPSPL AKRAGKYRWQ LLLQTQHRSL MQKLLTSAKP AIELLPNAKK
VRWNLDIEPQ DLS
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