Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00709 |
Symbol | tpiA |
ID | 5554954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 701494 |
End bp | 702246 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640906203 |
Product | triosephosphate isomerase |
Protein accession | YP_001443937 |
Protein GI | 156973030 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0149] Triosephosphate isomerase |
TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTAACT GGAAACTAAA CGGTAGCAAA GCAATGGTAA CTGAGCTACT AACAGGTATT AACGCTGAGC TTGAAGGCGT TGAAGGTGTA GACGTAGCAG TAGCTCCACC AGCTCTTTAC ATCGATCTAG CTGAGCGTGT AATCGCTGAA GGCGGTAACA AAGTTATCCT AGGTGCACAA AACACTGACC TAAACAACAG CGGTGCTTTC ACTGGCGACA TGTCTCCAGA AATGCTGAAA GACTTCGGTG CTTCTCACAT CATCATCGGT CACTCAGAGC GTCGTGAATA CCACAACGAA TCTGACGAGT TCATCGCGAA GAAATTCAAC TTCCTAAAAG AAAACGGTCT AACGCCTGTT TTCTGTATCG GTGAATCTGA AGCTCAAAAC GAAGCTGGCG AAACTGAAGC AGTATGTGCA CGTCAAATCA ACGCTGTTAT CGACACTTAC GGTGTTGAAG CTCTAAACGG CGCAATCATC GCTTACGAAC CAATCTGGGC TATCGGTACT GGTAAAGCAG CAACAGCTGA AGATGCACAA CGCATCCACG CTTCTATCCG CGCACTAATC GCAGCGAAAG ACGAAGCAGT TGCAGCACAA GTAATCATTC AATACGGCGG TTCTGTTAAG CCAGAAAACG CTGAAGCTTA CTTCTCTCAA CCAGACATCG ACGGTGCTCT AGTTGGCGGC GCTTCTCTAG ACGCTAAGAG CTTCGTAGCT ATCGCTAAAG CAGCGGCAGC AGCTAAAGCT TAA
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Protein sequence | MGNWKLNGSK AMVTELLTGI NAELEGVEGV DVAVAPPALY IDLAERVIAE GGNKVILGAQ NTDLNNSGAF TGDMSPEMLK DFGASHIIIG HSERREYHNE SDEFIAKKFN FLKENGLTPV FCIGESEAQN EAGETEAVCA RQINAVIDTY GVEALNGAII AYEPIWAIGT GKAATAEDAQ RIHASIRALI AAKDEAVAAQ VIIQYGGSVK PENAEAYFSQ PDIDGALVGG ASLDAKSFVA IAKAAAAAKA
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