Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00687 |
Symbol | |
ID | 5554920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 672652 |
End bp | 675345 |
Gene Length | 2694 bp |
Protein Length | 897 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640906182 |
Product | hypothetical protein |
Protein accession | YP_001443916 |
Protein GI | 156973009 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTAAAC GATATTTCTC GATTGCCGCC TGTGTATTGG CAAGTGTTTT TGCGCCATTC AGTCATGCGC AAACTCCAAC CCCGGAACAA ATGCAAATGT TCCAGAGCCT ACCTGCTGAC CAACAACAAG CACTAGCAAG TAAGTACGGC ATTTCTCTCC CTTCTGGCTC TTCTTCTCAG CCAAGTAACT ATCAAAACCC TCAAGTGATT GATCCTCGCC CAGAGGTGAG TAAAGCCAAT CAAACGAACC AAGCGGATGT GATTAAAGAA GATGAAGAGC TTAAGCGCTT CGGCTTGGAT CTATTTGCGG GTTCACCAAC GACATTCGCC CCAGTAAGTG ATGTACCTGT TCCGGCCGAC TACACGGTAG GAGCTGGTGA CGAAATCGTT ATCCAGCTGT TTGGTAAAGA GAACACGACA CACCGTTTAC GAGTCAATCG CGCGGGTACC ATCAACTTCC CATCACTGGG CCCAGTTCAA GTAGCTGGCA TGAGCTTTTC TGACGTTCGT GATTCACTAA ACCAACGTGT AAAAGAGCAA ATGATTGGTG TTCGCAGTGA TATTTCACTG GGTGAGATGC GCACCATGCA AGTGTTTGTA ATGGGGGATG CCTACAAACC GGGTGCTTAC ACCGTCAGCG CGCTAACCAC CATTTCTCAA GCCATTTACT ACAGTGGTGG TTTTGGTGAG AGCGGCGCAT TGCGTAACGT GCAGTTAAAG CGCAATGGTC AGGTGATTCG CAAGCTTGAT ATGTATGACC TATTGTTGAA AGGCGACGCG CGCAACGATG TTCGACTATT ACCTGGCGAT GTGGTCTTTA TTGGTGCTGT TGGCAATACC ATCGCTATTG ATGGCGAGGT AAACCGCCCT GCAATCTATG AAGTGAAATC AGGTGAAACC TACAAGCAAG CTATTCAAAT GGCCGGCGGT TTTACGGCGA ACGCTTATAG CGATCAAATC GAAGTGAAGC GTTATGCCGC TAAAGGTGCT CGCGATGCAT TAACACTGAA CTTTAGCCAA TCACATGACC AACAAACCAA AGTTAAAGAT GGTGATGTGG TTAATGTGCT TAAGAAAAAT GAAGAGCTGA CACGTTACGT ACAAATTGAA GGTGATGTTC GTCATCCGGG CTTTTTCGAA TGGAAGAGTG GCCTTCGTAT TGCTGACTTG TTCCAATCAG TAGATACGTC ATTTAACTCT ACTGCAGACG TTAACTATGC TGTCGTTGTC CGTGAGATTA ACCCACAACG TGATATCGAG GTTTATCAAG TAAATCTTGC GAACGCGATT CTTTCTCCAA GCAGTAAAGA TAACCTAAAG CTAAACTCGC GTGACCGAGT ACTGGTATTT AACCGTTTCA ATAATGAAGA TTTAGATACC CTTGCGGATC AAGATACAGT TACGAAAGCG AAGACGCTTG AGCAAGCACA ATTTAAAGCC GAGCTGGATC AACAAAAAGA GCAAGAAGTG ATGAGCTCTT CTGTTGCAAT ATCCTCAGCG ACAGACAATA TGTCTATGGG ACAATCTTCA ATTGAAGAAT CAGAACAACC GAAAATCATA TTCCGTGGCA AAGAAATTAC CAAAGAAGAC TTTGATGCGC TGAAACAAAA CACCCGTCGC ACTTTACTTG CTCCGGTACT TTTGCAGCTC CAGCAGCAAT CTCGTTTAGG GTTAGCACCG CAAATTGCTG AAGTATTTGG TGAGGTCAAA CACCCTGGTC GTTACCCACT CACGCCACGC ATGTCAGTGT CTACCCTCAT CGAAGCAGCA GGTGGCCTAA CGTACAATGC ATTTACCATT AATGCAGAGT TGGCTCGTAC TGTGATTAGC AGCAAGGATG AACGAGCTTC GATCGATGTA GAACGCATTG ACTTACGTAA AGCAATTCAA GGAAGCACTG CAGACGATGC AATCCTTGTT GGCCGTGACC GTTTGAACAT CCTTGAAAAA CCGAATGTTA AACTACAAAG CACAGTCACG CTGCAAGGTG AAGTTCGCTT CCCTGGTATG TACACAGTTC GCCAAGGTGA AACCTTAGGT GAACTGTTAG AGCGTGCAGG TGGGTTAACC GAATTCGCAC ATCCGCAAGG GGCTATTTTT ACTCGTGAGG CTTTGCGCCT TCAAGAGCAA AAGCTGCTGG ACCAATATGC TGCAGATATG CGAGCAGAAA CAGCGAAGAA AACCTTCCGC GCAGACAGCA ATATGAGCTC GGTCATTTCT GACCCAGATA AAACGCTTAA GTTTGTTGAA GAGGCTAGCC GCAGTAAAGC CCTTGGTCGC ATGGTAGTGC AGCTTAATCG CATCTTGAAA GACGAGCGCT CAGCCGACTT TATGTTAGAA GATGGAGACT TCTTATTTGT GCCGACCTTC CGCAACACGG TATCAATCAT GGGTGAAGTT CAGGTGCCAA TTACGTACTT GCTGGATAAC AAGCTAGACG TCGATGACTA CCTAAACAAA GCTGGTGGTG CGAAGAAGCA AGCAGACGAA GACCGTATCT TTGTTGTGCG CGCAGACGGT TCGGTTTACA AACCAACATC AGGCTACTGG TTCGGTAACA GTCATGAAGA GTTAAAAGCG GGCGACACAA TTGTTGTGCC GATCGATACT GATTACCGTG ATGCGTTAAG TACTTGGACA GCAGCTACAC AGATCCTTTA CCAAACTGGT GTAGCGATCA ACGCGTTGAA GTAA
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Protein sequence | MLKRYFSIAA CVLASVFAPF SHAQTPTPEQ MQMFQSLPAD QQQALASKYG ISLPSGSSSQ PSNYQNPQVI DPRPEVSKAN QTNQADVIKE DEELKRFGLD LFAGSPTTFA PVSDVPVPAD YTVGAGDEIV IQLFGKENTT HRLRVNRAGT INFPSLGPVQ VAGMSFSDVR DSLNQRVKEQ MIGVRSDISL GEMRTMQVFV MGDAYKPGAY TVSALTTISQ AIYYSGGFGE SGALRNVQLK RNGQVIRKLD MYDLLLKGDA RNDVRLLPGD VVFIGAVGNT IAIDGEVNRP AIYEVKSGET YKQAIQMAGG FTANAYSDQI EVKRYAAKGA RDALTLNFSQ SHDQQTKVKD GDVVNVLKKN EELTRYVQIE GDVRHPGFFE WKSGLRIADL FQSVDTSFNS TADVNYAVVV REINPQRDIE VYQVNLANAI LSPSSKDNLK LNSRDRVLVF NRFNNEDLDT LADQDTVTKA KTLEQAQFKA ELDQQKEQEV MSSSVAISSA TDNMSMGQSS IEESEQPKII FRGKEITKED FDALKQNTRR TLLAPVLLQL QQQSRLGLAP QIAEVFGEVK HPGRYPLTPR MSVSTLIEAA GGLTYNAFTI NAELARTVIS SKDERASIDV ERIDLRKAIQ GSTADDAILV GRDRLNILEK PNVKLQSTVT LQGEVRFPGM YTVRQGETLG ELLERAGGLT EFAHPQGAIF TREALRLQEQ KLLDQYAADM RAETAKKTFR ADSNMSSVIS DPDKTLKFVE EASRSKALGR MVVQLNRILK DERSADFMLE DGDFLFVPTF RNTVSIMGEV QVPITYLLDN KLDVDDYLNK AGGAKKQADE DRIFVVRADG SVYKPTSGYW FGNSHEELKA GDTIVVPIDT DYRDALSTWT AATQILYQTG VAINALK
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