Gene VIBHAR_00681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00681 
Symbol 
ID5555172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp665291 
End bp666280 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content44% 
IMG OID640906176 
Productlipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 
Protein accessionYP_001443910 
Protein GI156973003 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID[TIGR02208] lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAATC AACGTGATGA TTTCGATCCT AAAGCTTATA ACCCTGAATT TGAGCGCCAC 
TTTTTAGCGC CGAAGTATTG GGGGACGTGG ATAGGCGTTG TCCTTTCTTT GCCGCTTGCT 
TTATTACCTT TAGGGGTTCA GAAATGGCTA GCAAAAACCA TCGCGAAGAA GCTGGCTAAA 
TCGCACAAAG GTCCAGCTCA CCGAGCTCGT GTCAACTTTG AGCTGTGCTT TCCAGAGAAG 
TCATTTGAAG AGCGCGAAGC ACTGATAGAA AAAACGCTTT ATACCGCAGC ATTGTTCTTT 
TTCCGTTTCA GCTTACTAAG CTTACGCTCA TCTAAATGGT TACAGCAGCG TTGCCAAATC 
CGAGGTTTAG ACATCCTACA AAAACACATC GACAGTGATG AGAAAATCAT TTTGATGGTT 
CCACACTCAT GGGCGATTGA TATTCCTGCG GTGTTGCTCG CTTCGATGGG AATGCCCGTC 
TCTGCAATGG CAAAAAAGCA GAAAAATGAA GTGGCAGATT GGCTAATGCA CGAACAACGT 
GTGCAATATG GCGGTCGCGT GTATGAACGC TCTGGTGGTG TTAAGCCGTT TTTGAAATCA 
GTTCGCGACG GTTACATTGG CTATTACTTA CCCGATCAGG ATCATGGTCC TGAACACAGC 
GTTTTTGTCG ATTTCTTTGC GACCAGAAAA GCAACGCTTC CAGGCTTGGG TAAAATTGCC 
AAATTATCAC GCGCTAAAGT GTTACCTATG TTTGCTTCTA TGAATACAGA AGATGGTACG 
TTTGATATCG AAATTTTACC GGCGTTTGAG CTAGATAAAG GCGAAGAACA AGACGCTCGC 
ACCTGTAATC AAGCGATCGA GTACTTTGTT GCAAATAAAC CAGAACAATA CATGTGGGTA 
CTCCAACTTC TGCACTCTCA AGAAGACGGC AATAACTATT ACAACCTATT TAAACCGAGA 
TACAACACAG ACTGGCAAAT AAGCAAATGA
 
Protein sequence
MTNQRDDFDP KAYNPEFERH FLAPKYWGTW IGVVLSLPLA LLPLGVQKWL AKTIAKKLAK 
SHKGPAHRAR VNFELCFPEK SFEEREALIE KTLYTAALFF FRFSLLSLRS SKWLQQRCQI 
RGLDILQKHI DSDEKIILMV PHSWAIDIPA VLLASMGMPV SAMAKKQKNE VADWLMHEQR 
VQYGGRVYER SGGVKPFLKS VRDGYIGYYL PDQDHGPEHS VFVDFFATRK ATLPGLGKIA 
KLSRAKVLPM FASMNTEDGT FDIEILPAFE LDKGEEQDAR TCNQAIEYFV ANKPEQYMWV 
LQLLHSQEDG NNYYNLFKPR YNTDWQISK