Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00657 |
Symbol | |
ID | 5555487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 644316 |
End bp | 645125 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640906152 |
Product | formamidopyrimidine-DNA glycosylase |
Protein accession | YP_001443886 |
Protein GI | 156972979 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGAAT TACCTGAAGT TGAAGTAAGC CGAATGGGCA TCAGCCCACA TATGATTGGC CAAACGATCA AGGCATTTGT ATTTAGAACC CCGAAACTGC GTTGGGATAT CCCGCAAAAG CTTAAAAAGC TGGAAGGGCA GGTGATTCGG AATATCAGTC GCCGCGCTAA GTATCTGTTG ATAGAAACGG ACGAAGGAAC TGCGATTGTT CACTTAGGTA TGTCGGGTTC ACTGCGTGTG TTAGATGCTG ATTTTCCTCC AGCAAAGCAC GATCATGTGG ATCTCAAACT AACTAATGGA AAGATACTGC GTTACAACGA TCCACGTCGT TTTGGCGCAT GGCTGTGGAG TGCGCCCAAT GAGCCACATG CAGTTTTAGG TCATATGGGA CCAGAGCCAT TAACTGAAGA GTTCAACGCG GACTACGTAG CAGAGAAAGC CAAAGGTAAG CGCGTTGCGA TTAAGCAGTT CATCATGGAC AACAAAATCG TTGTTGGAGT CGGAAATATC TACGCCAACG AATCATTGTT TAAATCACGT ATTCATCCCA CTCGCCCTGC AGGTAAGCTA ACCAAGAAAG AGTGGCAATT GCTGGTGGAG AACATTAAAG CCACGCTAGA GATCGCTATA CAGCAAGGCG GAACCACACT GAAAGATTTC GCCCAAGCTG ATGGCAAGCC AGGTTACTTC GCACAAGAGC TGTTAGTTTA CGGAAAAGCC GGAGAGCCAT GCCCAGAATG CGGCGAAGCT CTCCAAGAGC AAAAGATAGG CCAACGTAAT ACCTTCTTTT GCGGAGTATG TCAGAAGTAG
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Protein sequence | MPELPEVEVS RMGISPHMIG QTIKAFVFRT PKLRWDIPQK LKKLEGQVIR NISRRAKYLL IETDEGTAIV HLGMSGSLRV LDADFPPAKH DHVDLKLTNG KILRYNDPRR FGAWLWSAPN EPHAVLGHMG PEPLTEEFNA DYVAEKAKGK RVAIKQFIMD NKIVVGVGNI YANESLFKSR IHPTRPAGKL TKKEWQLLVE NIKATLEIAI QQGGTTLKDF AQADGKPGYF AQELLVYGKA GEPCPECGEA LQEQKIGQRN TFFCGVCQK
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