Gene VIBHAR_00657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00657 
Symbol 
ID5555487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp644316 
End bp645125 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content47% 
IMG OID640906152 
Productformamidopyrimidine-DNA glycosylase 
Protein accessionYP_001443886 
Protein GI156972979 
COG category[L] Replication, recombination and repair 
COG ID[COG0266] Formamidopyrimidine-DNA glycosylase 
TIGRFAM ID[TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGAAT TACCTGAAGT TGAAGTAAGC CGAATGGGCA TCAGCCCACA TATGATTGGC 
CAAACGATCA AGGCATTTGT ATTTAGAACC CCGAAACTGC GTTGGGATAT CCCGCAAAAG
CTTAAAAAGC TGGAAGGGCA GGTGATTCGG AATATCAGTC GCCGCGCTAA GTATCTGTTG
ATAGAAACGG ACGAAGGAAC TGCGATTGTT CACTTAGGTA TGTCGGGTTC ACTGCGTGTG
TTAGATGCTG ATTTTCCTCC AGCAAAGCAC GATCATGTGG ATCTCAAACT AACTAATGGA
AAGATACTGC GTTACAACGA TCCACGTCGT TTTGGCGCAT GGCTGTGGAG TGCGCCCAAT
GAGCCACATG CAGTTTTAGG TCATATGGGA CCAGAGCCAT TAACTGAAGA GTTCAACGCG
GACTACGTAG CAGAGAAAGC CAAAGGTAAG CGCGTTGCGA TTAAGCAGTT CATCATGGAC
AACAAAATCG TTGTTGGAGT CGGAAATATC TACGCCAACG AATCATTGTT TAAATCACGT
ATTCATCCCA CTCGCCCTGC AGGTAAGCTA ACCAAGAAAG AGTGGCAATT GCTGGTGGAG
AACATTAAAG CCACGCTAGA GATCGCTATA CAGCAAGGCG GAACCACACT GAAAGATTTC
GCCCAAGCTG ATGGCAAGCC AGGTTACTTC GCACAAGAGC TGTTAGTTTA CGGAAAAGCC
GGAGAGCCAT GCCCAGAATG CGGCGAAGCT CTCCAAGAGC AAAAGATAGG CCAACGTAAT
ACCTTCTTTT GCGGAGTATG TCAGAAGTAG
 
Protein sequence
MPELPEVEVS RMGISPHMIG QTIKAFVFRT PKLRWDIPQK LKKLEGQVIR NISRRAKYLL 
IETDEGTAIV HLGMSGSLRV LDADFPPAKH DHVDLKLTNG KILRYNDPRR FGAWLWSAPN
EPHAVLGHMG PEPLTEEFNA DYVAEKAKGK RVAIKQFIMD NKIVVGVGNI YANESLFKSR
IHPTRPAGKL TKKEWQLLVE NIKATLEIAI QQGGTTLKDF AQADGKPGYF AQELLVYGKA
GEPCPECGEA LQEQKIGQRN TFFCGVCQK