Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00653 |
Symbol | radC |
ID | 5555835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 642164 |
End bp | 642838 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640906148 |
Product | DNA repair protein RadC |
Protein accession | YP_001443882 |
Protein GI | 156972975 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2003] DNA repair proteins |
TIGRFAM ID | [TIGR00608] DNA repair protein radc |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACTGA AAACCTTGCC TAACGAGTCC ATGCCAAGAG AGAAATTGCT GCAACGCGGT CCGCAAGCGC TATCGGATGC GGAGTTACTT GCAATTTTCC TACGTACAGG CACGCAAGGC ATGAACGTAA TAGAGCTTTC TGACTTTCTT ATTCAAGACT TTGGATCACT GCGCCAGCTG TTCTCTGCCT CAGAGAAAGA GTTTTGCCAG CATAAAGGGT TAGGGCAAGC GAAATACGTG CAGTTACAAG CTGTTTTGGA AATGACGCAA CGCTATTTAG CCGAGACATT AAAACGTGGT GACGCGTTAA CCAGCCCAGA ACAAACCAAA CTTTATCTTT CCTCTATATT AAGAGACCGT CAAAGAGAGG CTTTTTACAT TCTTTTCTTA GATAACCAAC ATCGGGTGAT AAAAGATGAG ATTTTATTCG AAGGTACACT CGATGCTGCA TCGGTTTATC CGAGAGAAGT CGTCAAACGC GCCTTACACC ACAACGCTGC TGCATTGATT CTGGCCCACA ACCACCCGTC AGGTGTAGCG GAGCCGAGCC AAGCAGACAG AAGGATTACC CGGCGTTTAA TCGACGCTTT GGGCCTAGTA GATATTCGAA TTTTGGACCA TTTCGTTATC GGAGATGGGG AAAGCGTCTC TTTTGCCGAA AGAGGTTGGA TATAA
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Protein sequence | MTLKTLPNES MPREKLLQRG PQALSDAELL AIFLRTGTQG MNVIELSDFL IQDFGSLRQL FSASEKEFCQ HKGLGQAKYV QLQAVLEMTQ RYLAETLKRG DALTSPEQTK LYLSSILRDR QREAFYILFL DNQHRVIKDE ILFEGTLDAA SVYPREVVKR ALHHNAAALI LAHNHPSGVA EPSQADRRIT RRLIDALGLV DIRILDHFVI GDGESVSFAE RGWI
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