| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_00643 |
|---|
| Symbol | |
|---|
| ID | 5554373 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | + |
|---|
| Start bp | 633006 |
|---|
| End bp | 633878 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640906138 |
|---|
| Product | ABC oligopeptide transporter ATPase component |
|---|
| Protein accession | YP_001443872 |
|---|
| Protein GI | 156972965 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAAAGTG AACAAGTCAT AAAAGAGGAT GTTATGGCCA AAGAAGTATT AAGAATTGAA
AATCTTAAGC AGCACTTTGT ATCTGGTAAA GGACTGTTTA AGAAAGGCTA CACCATCAAA
GCGGTAGATG GTGTGTCGCT ATCAGTAGGT GAGGGGGAAA CCCTTGGCCT AGTAGGTGAG
TCTGGTTGTG GTAAGAGTAC CCTTGGCCGC ACGATTCTCA AGTTGTACGA GCCAACGGAA
GGTAAGATTT TCTTTGAAGG TAAAGACATC ACCAAGTTTT CTGTCAAAGA AATGCGTTCG
TTGCGTAAAG ACATGCAGAT TGTCTTTCAA GACCCAATGG AATCACTCAA CCAACGTCAT
ACCATTGGCA TGATTCTCGA AGAGCCGTAT GTGATTCACA ATATCGGTAC TTCTGCAGAG
CGTAAGCAAT GGGTGAAAGA GCTACTGGTT AAAGTTGGCT TGCCAGAAAC CGCAGTGAAC
CGCTATCCGC ATGAGTTTTC AGGTGGTCAG CGTCAGCGTA TTGGTATTGC ACGTGCGATT
GCACTTAAGC CTAAGTTGCT GATTTGTGAT GAATCGGTGT CGGCATTGGA CGTATCGGTT
CAGGCGCAGA TCCTAAACTT ACTGCTTCAA CTGCAACAAG AGATGAATTT AGCGATTATC
TTTATCTCGC ATGATTTGTC TGTTGTGAAG CATGTCTCTG ACAAAGTGGC GGTGATGTAT
TTTGGCAAGG TAGTCGAAGC GGGTAACGCG AAAGAAATCT ACGCGAACCC TCAAAATGAC
TACACCAAGA AGCTCCTCTC TGCGATCCCA ATTACTCATC CGAAGTATCG CAAGAAAAAG
CGCTTAGCAG AAAAAAAGCA GCAAGTGGCG TAA
|
|---|
| Protein sequence | MQSEQVIKED VMAKEVLRIE NLKQHFVSGK GLFKKGYTIK AVDGVSLSVG EGETLGLVGE
SGCGKSTLGR TILKLYEPTE GKIFFEGKDI TKFSVKEMRS LRKDMQIVFQ DPMESLNQRH
TIGMILEEPY VIHNIGTSAE RKQWVKELLV KVGLPETAVN RYPHEFSGGQ RQRIGIARAI
ALKPKLLICD ESVSALDVSV QAQILNLLLQ LQQEMNLAII FISHDLSVVK HVSDKVAVMY
FGKVVEAGNA KEIYANPQND YTKKLLSAIP ITHPKYRKKK RLAEKKQQVA
|
|---|
| |