Gene VIBHAR_00642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00642 
Symbol 
ID5556070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp632145 
End bp633002 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content48% 
IMG OID640906137 
ProductABC transporter ATPase component 
Protein accessionYP_001443871 
Protein GI156972964 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAACG ATGTAATCCT GAGTGTTAAA GACCTAGAAG TGGAATTCAC TACTGATGAC 
GGCCCAGTGA AAGTACTGCA TGGCGTGAAC TTTGATGTTC GCGCTGGGCG TACCCTTGGC
CTAGTAGGCG AATCGGGCAG TGGTAAGAGT GTGACCTCCA TGTCCATCAT GGGTTTGCTG
CCGAAACCTT ACGGTAATAT CGTCAATGGT GAGGTTGATT ACCGCGGTAC AAACTTGGTG
ACACTGCCGG CAGAAGAAAT GTATGCCATG CGCGGTGATC GCATTTCAAT CATCTTCCAG
GATCCAATGA CGGCGCTTAA CCCAGTGCAC TCTATTGGTC GTCAGCTTTG TGAGGTGCTA
GAGCTACACC GTCCTGAGTT GGATAAGAAA GAACGTGAAG CTTACGCCAT TGAAATGTTG
GCGAAAGTGA AAATCCCAAT GCCAGAAAAG CGCTTGAATG AGTATCCACA CAATCTGTCT
GGCGGCATGC GTCAGCGTGT GATGATCGCC ATGGCGTTGG CGTGTAAGCC CGATATTCTG
ATTTGTGATG AGCCAACCAC TGCACTGGAT GTAACGGTAC AGGCGTCTAT TCTTGAACTA
ATGAACGAGC TGCAAGAAGA AACGGGCATG GCGATGATCT TCATTACCCA CGATCTTGGT
GTAGTTGCTG AAGTGTGTGA TGACGTGGCG GTGATGTATG GTGGTCGTAT TGTTGAAAAG
GCAGAGATTT TCGAGCTATT CGATAACCCG CAACACCCAT ACACTGAACG TTTGATGGGC
TTGATGCCAA GCTTAGATAA CGAGCCTAAG CAAATGATCG ACATTAAACC GATCGATGCC
AGCATGTTTG CTAGCTAA
 
Protein sequence
MENDVILSVK DLEVEFTTDD GPVKVLHGVN FDVRAGRTLG LVGESGSGKS VTSMSIMGLL 
PKPYGNIVNG EVDYRGTNLV TLPAEEMYAM RGDRISIIFQ DPMTALNPVH SIGRQLCEVL
ELHRPELDKK EREAYAIEML AKVKIPMPEK RLNEYPHNLS GGMRQRVMIA MALACKPDIL
ICDEPTTALD VTVQASILEL MNELQEETGM AMIFITHDLG VVAEVCDDVA VMYGGRIVEK
AEIFELFDNP QHPYTERLMG LMPSLDNEPK QMIDIKPIDA SMFAS