Gene VIBHAR_00633 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00633 
Symbol 
ID5553486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp621071 
End bp621700 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content50% 
IMG OID640906128 
Productperiplasmic protein TonB 
Protein accessionYP_001443862 
Protein GI156972955 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0810] Periplasmic protein TonB, links inner and outer membranes 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGTATC TGGCCTCAAT TGCACTGGCG CTCATTGTCT CCCTCGGATT GTTCTGGGGG 
ATGGACAAGC TAGTAAACAA AGAGCGCCAC GAGCTAGTGT CGAATGATGA TCTCCGTATG 
GTTGAATTCA TTCGCATTAA ACCGGACGAA AAAATACAGG AGAAAAAGCG CGAACTACCA 
AAACCACCAC CACCGAAACG TCCGCCACCG CCACCTGAAA TGAAGGTGAC GTCTACGGTC 
AAACCGGTGA TGGATCAAAT CCCAATGGAC ATGCCGAAAC TTGACCTACC AGTTAATGTT 
ACGGGTGGTT CAGTACTTGG TCACTACTCT CAGGGCGGTG GTTCAGTAGC GGGATCGGGT 
GGTCCAGTAC CATTGGCGAC TTTCCAACCT CAAATGCCTC GTAAAGCGGC GAAGTCAGGT 
CTAGAGAAAG GCGTGGTATT GATTGAATTC ACCGTTAACG CTCGCGGCGC GGTTGAAGAC 
ATCAAAGTAG TAAAAGAGAC ACCTCGTCGA CTTGGTTTGG GTAAAGCAGC AAGAAAGACC 
GTATCAAAAT GGACTTTCAA ACCTAAGATG GTTGATGGAC AACCGGTGGC CTCGCGCATG 
GCTCAAGAAA TTGAGTTCAC CACCAACTAG
 
Protein sequence
MRYLASIALA LIVSLGLFWG MDKLVNKERH ELVSNDDLRM VEFIRIKPDE KIQEKKRELP 
KPPPPKRPPP PPEMKVTSTV KPVMDQIPMD MPKLDLPVNV TGGSVLGHYS QGGGSVAGSG 
GPVPLATFQP QMPRKAAKSG LEKGVVLIEF TVNARGAVED IKVVKETPRR LGLGKAARKT 
VSKWTFKPKM VDGQPVASRM AQEIEFTTN