Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00621 |
Symbol | ompR |
ID | 5554718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 606922 |
End bp | 607641 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640906116 |
Product | osmolarity response regulator |
Protein accession | YP_001443850 |
Protein GI | 156972943 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGAAA ATTATAAAAT ATTAGTGGTT GATGACGATG CTCGTTTACG TGCTCTGTTG GAGCGTTACC TTTCTGAGCA AGGTTTTCAA GTGAGAAGTG TCGCTAACGG CGAGCAGATG GACCGTCTTC TGACCCGTGA AAACTTCCAC CTTATGGTGT TGGATTTAAT GTTGCCGGGC GAAGATGGCT TATCGATTTG TCGTCGTCTA CGTCACGCCA ACAACATGCT ACCTATTCTG ATGCTGACAG CGAAAGGCGA TGAAGTCGAT CGTATCGTTG GCCTTGAAGT GGGTGCAGAC GATTACCTAC CAAAACCGTT TAACCCGCGT GAACTGCTTG CTCGTATTAA AGCAGTACTT CGCCGTCAAA CGGTTGAACT GCCAGGTGCA CCAAGTACGG AAGAGAAAGT CGTTGAGTTC GGTGATTTTC GTCTGAATTT GGGTACACGT GAAATGTTCC GTGGTGATGA AGCTATGCCA CTGACCTCGG GTGAATTCGC GGTGTTGAAA GCGCTTGTGA CCAACGCTCG TGAGCCGATG TCACGTGATA AACTGATGAA CATGGCTCGT GGTCGTGAAT ACTCAGCGAT GGAACGTTCT ATCGACGTTC AAATCTCACG TCTACGCCGC ATGTTAGAAG ACGACCCAAG CAAACCTCGC TACATCCAAA CAGTATGGGG CTTAGGTTAC GTGTTCGTCC CAGACGGCAA AGAAGCGTAA
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Protein sequence | MQENYKILVV DDDARLRALL ERYLSEQGFQ VRSVANGEQM DRLLTRENFH LMVLDLMLPG EDGLSICRRL RHANNMLPIL MLTAKGDEVD RIVGLEVGAD DYLPKPFNPR ELLARIKAVL RRQTVELPGA PSTEEKVVEF GDFRLNLGTR EMFRGDEAMP LTSGEFAVLK ALVTNAREPM SRDKLMNMAR GREYSAMERS IDVQISRLRR MLEDDPSKPR YIQTVWGLGY VFVPDGKEA
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