Gene VIBHAR_00621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00621 
SymbolompR 
ID5554718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp606922 
End bp607641 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content49% 
IMG OID640906116 
Productosmolarity response regulator 
Protein accessionYP_001443850 
Protein GI156972943 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGAAA ATTATAAAAT ATTAGTGGTT GATGACGATG CTCGTTTACG TGCTCTGTTG 
GAGCGTTACC TTTCTGAGCA AGGTTTTCAA GTGAGAAGTG TCGCTAACGG CGAGCAGATG
GACCGTCTTC TGACCCGTGA AAACTTCCAC CTTATGGTGT TGGATTTAAT GTTGCCGGGC
GAAGATGGCT TATCGATTTG TCGTCGTCTA CGTCACGCCA ACAACATGCT ACCTATTCTG
ATGCTGACAG CGAAAGGCGA TGAAGTCGAT CGTATCGTTG GCCTTGAAGT GGGTGCAGAC
GATTACCTAC CAAAACCGTT TAACCCGCGT GAACTGCTTG CTCGTATTAA AGCAGTACTT
CGCCGTCAAA CGGTTGAACT GCCAGGTGCA CCAAGTACGG AAGAGAAAGT CGTTGAGTTC
GGTGATTTTC GTCTGAATTT GGGTACACGT GAAATGTTCC GTGGTGATGA AGCTATGCCA
CTGACCTCGG GTGAATTCGC GGTGTTGAAA GCGCTTGTGA CCAACGCTCG TGAGCCGATG
TCACGTGATA AACTGATGAA CATGGCTCGT GGTCGTGAAT ACTCAGCGAT GGAACGTTCT
ATCGACGTTC AAATCTCACG TCTACGCCGC ATGTTAGAAG ACGACCCAAG CAAACCTCGC
TACATCCAAA CAGTATGGGG CTTAGGTTAC GTGTTCGTCC CAGACGGCAA AGAAGCGTAA
 
Protein sequence
MQENYKILVV DDDARLRALL ERYLSEQGFQ VRSVANGEQM DRLLTRENFH LMVLDLMLPG 
EDGLSICRRL RHANNMLPIL MLTAKGDEVD RIVGLEVGAD DYLPKPFNPR ELLARIKAVL
RRQTVELPGA PSTEEKVVEF GDFRLNLGTR EMFRGDEAMP LTSGEFAVLK ALVTNAREPM
SRDKLMNMAR GREYSAMERS IDVQISRLRR MLEDDPSKPR YIQTVWGLGY VFVPDGKEA