Gene VIBHAR_00613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00613 
SymbolnudE 
ID5554670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand- 
Start bp598010 
End bp598576 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content47% 
IMG OID640906108 
ProductADP-ribose diphosphatase NudE 
Protein accessionYP_001443842 
Protein GI156972935 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAAAA GGACCCCACC AGAGATTCTC TCTTGTCAGA CGGTCGCACA ATCTAAGCTG 
TTTGCTGTGG AAGCCCTCGA CCTTCGCTTC TCTAATGGCG AACTGCGTAC TTATGAACGC 
ATGAAACCAA GTGGTCGCGA TGCCGTGATG GTTGTGCCTG TCACTGAGCA AGGTGACTTA 
CTGTTAGTAC GCGAGTACGC GGCAGGCACA GAACGCTACG AACTGGGCTT TCCGAAAGGT 
CTTATCGACC CAGGAGAGAC ACCATTACAA GCAGCCGATC GAGAGTTAAA AGAAGAAATT 
GGTTTTGGCT CTCATGAGCT AACGCCATTA AAACAGGTGA TCCTTGCACC TTCTTACTTC 
TCCAGCAAAA TGACGCTGTT CTTAGGACAG AGCCTATACC CTGAGAAACA AGAAGGTGAC 
GAGCCAGAAC CATTAGAAAT CGTTCGCTGG CCATTAGCGC AAGCGGAAGA ACTATTAACG 
CACTTAGATT TTTGTGAAGC ACGAAGCATC ACAGCGTTGA TGTTGGCACT GAAACACTTA 
CAAAACACCA CTCACAAACA AAATTAA
 
Protein sequence
MSKRTPPEIL SCQTVAQSKL FAVEALDLRF SNGELRTYER MKPSGRDAVM VVPVTEQGDL 
LLVREYAAGT ERYELGFPKG LIDPGETPLQ AADRELKEEI GFGSHELTPL KQVILAPSYF 
SSKMTLFLGQ SLYPEKQEGD EPEPLEIVRW PLAQAEELLT HLDFCEARSI TALMLALKHL 
QNTTHKQN