Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00581 |
Symbol | |
ID | 5554497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 562001 |
End bp | 563392 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640906076 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_001443810 |
Protein GI | 156972903 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGAATC AACATACTGA ATCGAAACAG CAAATCGTCT GGGATCAAGC GGTATTGGAT AAGTACAACT ATTCCGGTCC GCGTTACACG TCGTACCCGA CAGCACTGGA GTTTCATGAA GCGTTTACCA TTTCGGACTA CGATATGGCA TGCACTCAGT ACCCAGATCG TCCGTTATCT CTGTACGTTC ACATTCCGTT CTGTCATAAG CTTTGCTACT ACTGTGGCTG TAATAAAGTG ATTACTCGCC ATTCGCACAA AGCTGACGAA TATTTGGATG TACTTGAGCA CGAGATCCGC CAACGCGCGT CACTATTGGG TGAACGCCAA GTGACTCAAT TGCATTTTGG TGGTGGTACA CCAACTTTCC TATCTGAGAA TCAGATTACG CGTGTGATGG ACTTGTTGCG CCAAGAGTTC ACTTTCAGTG CCGATGCGGA AATCAGTATT GAAGTTGATC CACGTGAGAT TGAGCTCACT ATGCTGGATC ACCTACGCAG TGAAGGCTTT AACCGCCTAA GTATTGGTGT TCAGGACTTC AACAAAGAAG TTCAGCAGCT TGTGAACCGT GAGCAAGATG AGGAATTTAT CTTTGCGATG GTTGCTCGTG CAAAAGAGCT TGGCTTCCGC TCTACTAACC TTGATTTGAT TTACGGCTTG CCGAAGCAGA CCAAAGCATC TTTTGCGAAG ACACTAGAGC AAGTGCTAGA AATGCAGCCG GGTCGTTTGT CCGTGTTTAA CTACGCGCAC ATGCCACAAC TGTTTGCTGC GCAGCGTAAG ATTAAAGATG AAGATCTGCC AAAAGCGGAA GAGAAGATGG CGATTCTGCA AGATACCATC GCAACGCTAA CGGGCGCTGG CTACCAATTT ATCGGTATGG ACCACTTTGC GATGCCGGAT GATGAGCTTG CTGTGGCTCA GCGTGAAGGC ATTTTGCACC GCAACTTCCA AGGCTACACT ACACAAGGTG AATGCGACTT GGTTGGCTTT GGTGTTTCGG CGATTTCAAT GATTGGTGAT GCGTACGCGC AAAACCAGAA AGAATTGAAG AAGTATTACG CACAGGTGAA TGAATCTCGC CACGCGCTGT GGAAAGGTGT GTCACTGGAT GCGGATGACT TATTGCGCCG TGAAGTGATC AAACAGCTTA TCTGTAACTT CAAGCTGGAT AAGAAGTCGA TTGAGTCTGA GTTCGGCGTG AAGTTCGAGC AATATTTCAA AGAAGATTTA GGTCTACTGC AAACCTTCAT CAATGATGAA TTGGTGGAAG TGGATGACAA TGAAATTCGC GTAACACTGC GTGGCCGCCT TCTGATTCGT AATATCTGTA TGTGCTTTGA TAAGTACCTA CGAGCGAAAG CGCGTCAGCA ACAATTCTCT CGCGTGATTT AA
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Protein sequence | MSNQHTESKQ QIVWDQAVLD KYNYSGPRYT SYPTALEFHE AFTISDYDMA CTQYPDRPLS LYVHIPFCHK LCYYCGCNKV ITRHSHKADE YLDVLEHEIR QRASLLGERQ VTQLHFGGGT PTFLSENQIT RVMDLLRQEF TFSADAEISI EVDPREIELT MLDHLRSEGF NRLSIGVQDF NKEVQQLVNR EQDEEFIFAM VARAKELGFR STNLDLIYGL PKQTKASFAK TLEQVLEMQP GRLSVFNYAH MPQLFAAQRK IKDEDLPKAE EKMAILQDTI ATLTGAGYQF IGMDHFAMPD DELAVAQREG ILHRNFQGYT TQGECDLVGF GVSAISMIGD AYAQNQKELK KYYAQVNESR HALWKGVSLD ADDLLRREVI KQLICNFKLD KKSIESEFGV KFEQYFKEDL GLLQTFINDE LVEVDDNEIR VTLRGRLLIR NICMCFDKYL RAKARQQQFS RVI
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