Gene VIBHAR_00581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00581 
Symbol 
ID5554497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp562001 
End bp563392 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content47% 
IMG OID640906076 
Productcoproporphyrinogen III oxidase 
Protein accessionYP_001443810 
Protein GI156972903 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR00538] oxygen-independent coproporphyrinogen III oxidase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAATC AACATACTGA ATCGAAACAG CAAATCGTCT GGGATCAAGC GGTATTGGAT 
AAGTACAACT ATTCCGGTCC GCGTTACACG TCGTACCCGA CAGCACTGGA GTTTCATGAA
GCGTTTACCA TTTCGGACTA CGATATGGCA TGCACTCAGT ACCCAGATCG TCCGTTATCT
CTGTACGTTC ACATTCCGTT CTGTCATAAG CTTTGCTACT ACTGTGGCTG TAATAAAGTG
ATTACTCGCC ATTCGCACAA AGCTGACGAA TATTTGGATG TACTTGAGCA CGAGATCCGC
CAACGCGCGT CACTATTGGG TGAACGCCAA GTGACTCAAT TGCATTTTGG TGGTGGTACA
CCAACTTTCC TATCTGAGAA TCAGATTACG CGTGTGATGG ACTTGTTGCG CCAAGAGTTC
ACTTTCAGTG CCGATGCGGA AATCAGTATT GAAGTTGATC CACGTGAGAT TGAGCTCACT
ATGCTGGATC ACCTACGCAG TGAAGGCTTT AACCGCCTAA GTATTGGTGT TCAGGACTTC
AACAAAGAAG TTCAGCAGCT TGTGAACCGT GAGCAAGATG AGGAATTTAT CTTTGCGATG
GTTGCTCGTG CAAAAGAGCT TGGCTTCCGC TCTACTAACC TTGATTTGAT TTACGGCTTG
CCGAAGCAGA CCAAAGCATC TTTTGCGAAG ACACTAGAGC AAGTGCTAGA AATGCAGCCG
GGTCGTTTGT CCGTGTTTAA CTACGCGCAC ATGCCACAAC TGTTTGCTGC GCAGCGTAAG
ATTAAAGATG AAGATCTGCC AAAAGCGGAA GAGAAGATGG CGATTCTGCA AGATACCATC
GCAACGCTAA CGGGCGCTGG CTACCAATTT ATCGGTATGG ACCACTTTGC GATGCCGGAT
GATGAGCTTG CTGTGGCTCA GCGTGAAGGC ATTTTGCACC GCAACTTCCA AGGCTACACT
ACACAAGGTG AATGCGACTT GGTTGGCTTT GGTGTTTCGG CGATTTCAAT GATTGGTGAT
GCGTACGCGC AAAACCAGAA AGAATTGAAG AAGTATTACG CACAGGTGAA TGAATCTCGC
CACGCGCTGT GGAAAGGTGT GTCACTGGAT GCGGATGACT TATTGCGCCG TGAAGTGATC
AAACAGCTTA TCTGTAACTT CAAGCTGGAT AAGAAGTCGA TTGAGTCTGA GTTCGGCGTG
AAGTTCGAGC AATATTTCAA AGAAGATTTA GGTCTACTGC AAACCTTCAT CAATGATGAA
TTGGTGGAAG TGGATGACAA TGAAATTCGC GTAACACTGC GTGGCCGCCT TCTGATTCGT
AATATCTGTA TGTGCTTTGA TAAGTACCTA CGAGCGAAAG CGCGTCAGCA ACAATTCTCT
CGCGTGATTT AA
 
Protein sequence
MSNQHTESKQ QIVWDQAVLD KYNYSGPRYT SYPTALEFHE AFTISDYDMA CTQYPDRPLS 
LYVHIPFCHK LCYYCGCNKV ITRHSHKADE YLDVLEHEIR QRASLLGERQ VTQLHFGGGT
PTFLSENQIT RVMDLLRQEF TFSADAEISI EVDPREIELT MLDHLRSEGF NRLSIGVQDF
NKEVQQLVNR EQDEEFIFAM VARAKELGFR STNLDLIYGL PKQTKASFAK TLEQVLEMQP
GRLSVFNYAH MPQLFAAQRK IKDEDLPKAE EKMAILQDTI ATLTGAGYQF IGMDHFAMPD
DELAVAQREG ILHRNFQGYT TQGECDLVGF GVSAISMIGD AYAQNQKELK KYYAQVNESR
HALWKGVSLD ADDLLRREVI KQLICNFKLD KKSIESEFGV KFEQYFKEDL GLLQTFINDE
LVEVDDNEIR VTLRGRLLIR NICMCFDKYL RAKARQQQFS RVI